Cluster: MGYG000003072_CGC19
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003072
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003072_3 | MGYG000003072_3_172 | 194667 | 195731 | - | CE8 |
| CAZyme | MGYG000003072_3 | MGYG000003072_3_173 | 195728 | 196840 | - | GH105 |
| TF | MGYG000003072_3 | MGYG000003072_3_174 | 196867 | 197850 | - | LacI |
| TC | MGYG000003072_3 | MGYG000003072_3_175 | 197884 | 199479 | - | 3.A.1.1.10 |
| TC | MGYG000003072_3 | MGYG000003072_3_176 | 199548 | 200429 | - | 3.A.1.1.29 |
| TC | MGYG000003072_3 | MGYG000003072_3_177 | 200459 | 201376 | - | 3.A.1.1.10 |
| TF | MGYG000003072_3 | MGYG000003072_3_178 | 201732 | 202535 | - | HTH_AraC | HTH_AraC |
| TC | MGYG000003072_3 | MGYG000003072_3_179 | 202653 | 203876 | + | 2.A.1.35.1 |
| TC | MGYG000003072_3 | MGYG000003072_3_180 | 203955 | 204737 | + | 3.A.1.23.5 |
| pfam | MGYG000003072_3 | MGYG000003072_3_181 | 204936 | 205664 | - | Ubie_methyltran | Methyltransf_29 | Methyltransf_11 | Methyltransf_12 | Methyltransf_23 | Methyltransf_25 | Methyltransf_31 |
| CAZyme | MGYG000003072_3 | MGYG000003072_3_182 | 205817 | 207112 | - | GT2 |
| STP | MGYG000003072_3 | MGYG000003072_3_183 | 207272 | 208150 | - | GGDEF |
| CAZyme | MGYG000003072_3 | MGYG000003072_3_184 | 208172 | 209281 | - | GH126 |
Gene ID: MGYG000003072_3_172
Type: CAZyme
Location: 194667 - 195731 (-)
Type: CAZyme
Location: 194667 - 195731 (-)
Gene ID: MGYG000003072_3_173
Type: CAZyme
Location: 195728 - 196840 (-)
Type: CAZyme
Location: 195728 - 196840 (-)
Gene ID: MGYG000003072_3_174
Type: TF
Location: 196867 - 197850 (-)
Type: TF
Location: 196867 - 197850 (-)
Gene ID: MGYG000003072_3_175
Type: TC
Location: 197884 - 199479 (-)
Type: TC
Location: 197884 - 199479 (-)
Gene ID: MGYG000003072_3_176
Type: TC
Location: 199548 - 200429 (-)
Type: TC
Location: 199548 - 200429 (-)
Gene ID: MGYG000003072_3_177
Type: TC
Location: 200459 - 201376 (-)
Type: TC
Location: 200459 - 201376 (-)
Gene ID: MGYG000003072_3_178
Type: TF
Location: 201732 - 202535 (-)
Type: TF
Location: 201732 - 202535 (-)
Gene ID: MGYG000003072_3_179
Type: TC
Location: 202653 - 203876 (+)
Type: TC
Location: 202653 - 203876 (+)
Gene ID: MGYG000003072_3_180
Type: TC
Location: 203955 - 204737 (+)
Type: TC
Location: 203955 - 204737 (+)
Gene ID: MGYG000003072_3_181
Type: pfam
Location: 204936 - 205664 (-)
Type: pfam
Location: 204936 - 205664 (-)
Gene ID: MGYG000003072_3_182
Type: CAZyme
Location: 205817 - 207112 (-)
Type: CAZyme
Location: 205817 - 207112 (-)
Gene ID: MGYG000003072_3_183
Type: STP
Location: 207272 - 208150 (-)
Type: STP
Location: 207272 - 208150 (-)
Gene ID: MGYG000003072_3_184
Type: CAZyme
Location: 208172 - 209281 (-)
Type: CAZyme
Location: 208172 - 209281 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Paenibacillales
Family
Paenibacillaceae
Genus
Paenibacillus
Species
Paenibacillus amylolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.