Cluster: MGYG000003072_CGC16
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000003072
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003072_3 | MGYG000003072_3_25 | 24772 | 25590 | - | 3.A.1.1.42 |
| TC | MGYG000003072_3 | MGYG000003072_3_26 | 25590 | 26483 | - | 3.A.1.1.7 |
| STP | MGYG000003072_3 | MGYG000003072_3_27 | 26622 | 27965 | - | SBP_bac_1 |
| TF | MGYG000003072_3 | MGYG000003072_3_28 | 28456 | 29487 | + | LacI |
| TC | MGYG000003072_3 | MGYG000003072_3_29 | 29688 | 31625 | - | 3.A.1.129.1 |
| TC | MGYG000003072_3 | MGYG000003072_3_30 | 31627 | 33540 | - | 3.A.1.129.1 |
| TC | MGYG000003072_3 | MGYG000003072_3_31 | 33542 | 34555 | - | 3.D.4.3.2 |
| TC | MGYG000003072_3 | MGYG000003072_3_32 | 34542 | 35957 | - | 3.D.4.3.2 |
| NULL(UNKNOWN) | MGYG000003072_3 | MGYG000003072_3_33 | 36340 | 37632 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003072_3 | MGYG000003072_3_34 | 37632 | 38624 | + | GT2 |
| CAZyme | MGYG000003072_3 | MGYG000003072_3_35 | 38626 | 40167 | + | GT4 |
| pfam | MGYG000003072_3 | MGYG000003072_3_36 | 40164 | 40835 | + | Ubie_methyltran | Methyltransf_11 | Methyltransf_12 | Methyltransf_25 | Methyltransf_31 |
| CAZyme | MGYG000003072_3 | MGYG000003072_3_37 | 41085 | 43118 | - | GT2 |
| CAZyme | MGYG000003072_3 | MGYG000003072_3_38 | 43197 | 45167 | - | GT2 |
| CAZyme | MGYG000003072_3 | MGYG000003072_3_39 | 45124 | 47406 | - | GT2 |
Gene ID: MGYG000003072_3_25
Type: TC
Location: 24772 - 25590 (-)
Type: TC
Location: 24772 - 25590 (-)
Gene ID: MGYG000003072_3_26
Type: TC
Location: 25590 - 26483 (-)
Type: TC
Location: 25590 - 26483 (-)
Gene ID: MGYG000003072_3_27
Type: STP
Location: 26622 - 27965 (-)
Type: STP
Location: 26622 - 27965 (-)
Gene ID: MGYG000003072_3_28
Type: TF
Location: 28456 - 29487 (+)
Type: TF
Location: 28456 - 29487 (+)
Gene ID: MGYG000003072_3_29
Type: TC
Location: 29688 - 31625 (-)
Type: TC
Location: 29688 - 31625 (-)
Gene ID: MGYG000003072_3_30
Type: TC
Location: 31627 - 33540 (-)
Type: TC
Location: 31627 - 33540 (-)
Gene ID: MGYG000003072_3_31
Type: TC
Location: 33542 - 34555 (-)
Type: TC
Location: 33542 - 34555 (-)
Gene ID: MGYG000003072_3_32
Type: TC
Location: 34542 - 35957 (-)
Type: TC
Location: 34542 - 35957 (-)
Gene ID: MGYG000003072_3_33
Type:
Location: 36340 - 37632 (+)
Type:
Location: 36340 - 37632 (+)
Gene ID: MGYG000003072_3_34
Type: CAZyme
Location: 37632 - 38624 (+)
Type: CAZyme
Location: 37632 - 38624 (+)
Gene ID: MGYG000003072_3_35
Type: CAZyme
Location: 38626 - 40167 (+)
Type: CAZyme
Location: 38626 - 40167 (+)
Gene ID: MGYG000003072_3_36
Type: pfam
Location: 40164 - 40835 (+)
Type: pfam
Location: 40164 - 40835 (+)
Gene ID: MGYG000003072_3_37
Type: CAZyme
Location: 41085 - 43118 (-)
Type: CAZyme
Location: 41085 - 43118 (-)
Gene ID: MGYG000003072_3_38
Type: CAZyme
Location: 43197 - 45167 (-)
Type: CAZyme
Location: 43197 - 45167 (-)
Gene ID: MGYG000003072_3_39
Type: CAZyme
Location: 45124 - 47406 (-)
Type: CAZyme
Location: 45124 - 47406 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Paenibacillales
Family
Paenibacillaceae
Genus
Paenibacillus
Species
Paenibacillus amylolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.