Cluster: MGYG000003072_CGC102
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003072
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003072_26 | MGYG000003072_26_39 | 41586 | 43100 | + | CBM91 | GH43_12 |
| TF | MGYG000003072_26 | MGYG000003072_26_40 | 43415 | 45715 | + | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000003072_26 | MGYG000003072_26_41 | 45867 | 46919 | - | GH18 |
| pfam | MGYG000003072_26 | MGYG000003072_26_42 | 46925 | 49558 | - | Transglut_core | Transglut_core |
| CAZyme | MGYG000003072_26 | MGYG000003072_26_43 | 49566 | 50588 | - | CBM9 |
| CAZyme | MGYG000003072_26 | MGYG000003072_26_44 | 50652 | 51938 | - | GH29 |
| STP | MGYG000003072_26 | MGYG000003072_26_45 | 52046 | 53641 | - | SBP_bac_1 |
| TC | MGYG000003072_26 | MGYG000003072_26_46 | 53683 | 54591 | - | 3.A.1.1.10 |
| TC | MGYG000003072_26 | MGYG000003072_26_47 | 54607 | 55578 | - | 3.A.1.1.10 |
| pfam | MGYG000003072_26 | MGYG000003072_26_48 | 56403 | 57326 | - | SLH | SLH |
| TC | MGYG000003072_26 | MGYG000003072_26_49 | 57688 | 59430 | + | 3.A.1.106.8 |
| TC | MGYG000003072_26 | MGYG000003072_26_50 | 59423 | 61240 | + | 3.A.1.106.8 |
Gene ID: MGYG000003072_26_39
Type: CAZyme
Location: 41586 - 43100 (+)
Type: CAZyme
Location: 41586 - 43100 (+)
Gene ID: MGYG000003072_26_40
Type: TF
Location: 43415 - 45715 (+)
Type: TF
Location: 43415 - 45715 (+)
Gene ID: MGYG000003072_26_41
Type: CAZyme
Location: 45867 - 46919 (-)
Type: CAZyme
Location: 45867 - 46919 (-)
Gene ID: MGYG000003072_26_42
Type: pfam
Location: 46925 - 49558 (-)
Type: pfam
Location: 46925 - 49558 (-)
Gene ID: MGYG000003072_26_43
Type: CAZyme
Location: 49566 - 50588 (-)
Type: CAZyme
Location: 49566 - 50588 (-)
Gene ID: MGYG000003072_26_44
Type: CAZyme
Location: 50652 - 51938 (-)
Type: CAZyme
Location: 50652 - 51938 (-)
Gene ID: MGYG000003072_26_45
Type: STP
Location: 52046 - 53641 (-)
Type: STP
Location: 52046 - 53641 (-)
Gene ID: MGYG000003072_26_46
Type: TC
Location: 53683 - 54591 (-)
Type: TC
Location: 53683 - 54591 (-)
Gene ID: MGYG000003072_26_47
Type: TC
Location: 54607 - 55578 (-)
Type: TC
Location: 54607 - 55578 (-)
Gene ID: MGYG000003072_26_48
Type: pfam
Location: 56403 - 57326 (-)
Type: pfam
Location: 56403 - 57326 (-)
Gene ID: MGYG000003072_26_49
Type: TC
Location: 57688 - 59430 (+)
Type: TC
Location: 57688 - 59430 (+)
Gene ID: MGYG000003072_26_50
Type: TC
Location: 59423 - 61240 (+)
Type: TC
Location: 59423 - 61240 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Paenibacillales
Family
Paenibacillaceae
Genus
Paenibacillus
Species
Paenibacillus amylolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.