Cluster: MGYG000003072_CGC100
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003072
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003072_25 | MGYG000003072_25_58 | 74397 | 75080 | + | 3.A.1.122.4 |
| TF | MGYG000003072_25 | MGYG000003072_25_59 | 75204 | 76151 | - | HTH_AraC | HTH_AraC |
| CAZyme | MGYG000003072_25 | MGYG000003072_25_60 | 76345 | 79518 | + | GH38 |
| pfam | MGYG000003072_25 | MGYG000003072_25_61 | 79636 | 80490 | - | Aldo_ket_red |
| CAZyme | MGYG000003072_25 | MGYG000003072_25_62 | 80656 | 81900 | - | GT1 |
| NULL(UNKNOWN) | MGYG000003072_25 | MGYG000003072_25_63 | 82082 | 82531 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003072_25 | MGYG000003072_25_64 | 82912 | 84165 | - | 1.A.23.4.5 |
| CAZyme | MGYG000003072_25 | MGYG000003072_25_65 | 84314 | 84955 | - | CE4 |
| TC | MGYG000003072_25 | MGYG000003072_25_66 | 85142 | 86017 | - | 3.A.1.1.41 |
| TC | MGYG000003072_25 | MGYG000003072_25_67 | 86033 | 86902 | - | 3.A.1.1.7 |
| STP | MGYG000003072_25 | MGYG000003072_25_68 | 87047 | 88360 | - | SBP_bac_1 |
| TF | MGYG000003072_25 | MGYG000003072_25_69 | 88533 | 90281 | - | HTH_AraC |
| TC | MGYG000003072_25 | MGYG000003072_25_70 | 90272 | 92293 | - | 8.A.59.2.1 |
Gene ID: MGYG000003072_25_58
Type: TC
Location: 74397 - 75080 (+)
Type: TC
Location: 74397 - 75080 (+)
Gene ID: MGYG000003072_25_59
Type: TF
Location: 75204 - 76151 (-)
Type: TF
Location: 75204 - 76151 (-)
Gene ID: MGYG000003072_25_60
Type: CAZyme
Location: 76345 - 79518 (+)
Type: CAZyme
Location: 76345 - 79518 (+)
Gene ID: MGYG000003072_25_61
Type: pfam
Location: 79636 - 80490 (-)
Type: pfam
Location: 79636 - 80490 (-)
Gene ID: MGYG000003072_25_62
Type: CAZyme
Location: 80656 - 81900 (-)
Type: CAZyme
Location: 80656 - 81900 (-)
Gene ID: MGYG000003072_25_63
Type:
Location: 82082 - 82531 (-)
Type:
Location: 82082 - 82531 (-)
Gene ID: MGYG000003072_25_64
Type: TC
Location: 82912 - 84165 (-)
Type: TC
Location: 82912 - 84165 (-)
Gene ID: MGYG000003072_25_65
Type: CAZyme
Location: 84314 - 84955 (-)
Type: CAZyme
Location: 84314 - 84955 (-)
Gene ID: MGYG000003072_25_66
Type: TC
Location: 85142 - 86017 (-)
Type: TC
Location: 85142 - 86017 (-)
Gene ID: MGYG000003072_25_67
Type: TC
Location: 86033 - 86902 (-)
Type: TC
Location: 86033 - 86902 (-)
Gene ID: MGYG000003072_25_68
Type: STP
Location: 87047 - 88360 (-)
Type: STP
Location: 87047 - 88360 (-)
Gene ID: MGYG000003072_25_69
Type: TF
Location: 88533 - 90281 (-)
Type: TF
Location: 88533 - 90281 (-)
Gene ID: MGYG000003072_25_70
Type: TC
Location: 90272 - 92293 (-)
Type: TC
Location: 90272 - 92293 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Paenibacillales
Family
Paenibacillaceae
Genus
Paenibacillus
Species
Paenibacillus amylolyticus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.