Cluster: MGYG000003069_CGC29
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003069
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003069_16 | MGYG000003069_16_34 | 41706 | 43997 | + | GT51 |
| CAZyme | MGYG000003069_16 | MGYG000003069_16_35 | 44156 | 45226 | - | GH43_22 |
| TF | MGYG000003069_16 | MGYG000003069_16_36 | 45455 | 46504 | + | LacI |
| TC | MGYG000003069_16 | MGYG000003069_16_37 | 46641 | 47552 | - | 3.A.1.1.36 |
| TC | MGYG000003069_16 | MGYG000003069_16_38 | 47549 | 48493 | - | 3.A.1.1.36 |
| TC | MGYG000003069_16 | MGYG000003069_16_39 | 48639 | 49943 | - | 3.A.1.1.47 |
Gene ID: MGYG000003069_16_34
Type: CAZyme
Location: 41706 - 43997 (+)
Type: CAZyme
Location: 41706 - 43997 (+)
Gene ID: MGYG000003069_16_35
Type: CAZyme
Location: 44156 - 45226 (-)
Type: CAZyme
Location: 44156 - 45226 (-)
Gene ID: MGYG000003069_16_36
Type: TF
Location: 45455 - 46504 (+)
Type: TF
Location: 45455 - 46504 (+)
Gene ID: MGYG000003069_16_37
Type: TC
Location: 46641 - 47552 (-)
Type: TC
Location: 46641 - 47552 (-)
Gene ID: MGYG000003069_16_38
Type: TC
Location: 47549 - 48493 (-)
Type: TC
Location: 47549 - 48493 (-)
Gene ID: MGYG000003069_16_39
Type: TC
Location: 48639 - 49943 (-)
Type: TC
Location: 48639 - 49943 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium pullorum_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003069_16_37 | vegan > omnivore | 1.39831 | 0.02059 |
| MGYG000003069_16_38 | vegan > omnivore | 1.80721 | 0.02059 |
| MGYG000003069_16_38 | vegetarian > omnivore | 1.13378 | 0.01285 |
| MGYG000003069_16_39 | vegan > omnivore | 2.03121 | 0.02059 |
| MGYG000003069_16_39 | vegetarian > omnivore | 1.45874 | 0.01285 |