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Cluster: MGYG000003069_CGC28

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003069_16 MGYG000003069_16_9 12280 13431 + 3.A.1.17.13
TC MGYG000003069_16 MGYG000003069_16_10 13453 14220 + 3.A.1.17.13
CAZyme MGYG000003069_16 MGYG000003069_16_11 14311 16368 - GH31_4
TC MGYG000003069_16 MGYG000003069_16_12 16451 17266 - 3.A.1.1.17
TC MGYG000003069_16 MGYG000003069_16_13 17269 18213 - 3.A.1.1.12
STP MGYG000003069_16 MGYG000003069_16_14 18319 19494 - SBP_bac_1
TF MGYG000003069_16 MGYG000003069_16_15 19706 20722 - LacI
TC MGYG000003069_16 MGYG000003069_16_16 21200 22489 + 9.B.124.1.3
TC MGYG000003069_16 MGYG000003069_16_17 22553 23215 + 9.B.124.1.6
TC MGYG000003069_16 MGYG000003069_16_18 23285 23827 + 9.B.124.1.6
Gene ID: MGYG000003069_16_9
Type: TC
Location: 12280 - 13431 (+)
Gene ID: MGYG000003069_16_10
Type: TC
Location: 13453 - 14220 (+)
Gene ID: MGYG000003069_16_11
Type: CAZyme
Location: 14311 - 16368 (-)
Gene ID: MGYG000003069_16_12
Type: TC
Location: 16451 - 17266 (-)
Gene ID: MGYG000003069_16_13
Type: TC
Location: 17269 - 18213 (-)
Gene ID: MGYG000003069_16_14
Type: STP
Location: 18319 - 19494 (-)
Gene ID: MGYG000003069_16_15
Type: TF
Location: 19706 - 20722 (-)
Gene ID: MGYG000003069_16_16
Type: TC
Location: 21200 - 22489 (+)
Gene ID: MGYG000003069_16_17
Type: TC
Location: 22553 - 23215 (+)
Gene ID: MGYG000003069_16_18
Type: TC
Location: 23285 - 23827 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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