Cluster: MGYG000003069_CGC27
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: galactan
- Genome ID: MGYG000003069
- CGC Family ID: CGCFAM_00484
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003069_14 | MGYG000003069_14_35 | 54863 | 56383 | - | 2.A.2.2.3 |
| CAZyme | MGYG000003069_14 | MGYG000003069_14_36 | 56694 | 59765 | + | GH2 |
| TF | MGYG000003069_14 | MGYG000003069_14_37 | 59987 | 61003 | - | LacI |
| TC | MGYG000003069_14 | MGYG000003069_14_38 | 61479 | 62822 | + | 3.A.1.1.44 |
Gene ID: MGYG000003069_14_35
Type: TC
Location: 54863 - 56383 (-)
Type: TC
Location: 54863 - 56383 (-)
Gene ID: MGYG000003069_14_36
Type: CAZyme
Location: 56694 - 59765 (+)
Type: CAZyme
Location: 56694 - 59765 (+)
Gene ID: MGYG000003069_14_37
Type: TF
Location: 59987 - 61003 (-)
Type: TF
Location: 59987 - 61003 (-)
Gene ID: MGYG000003069_14_38
Type: TC
Location: 61479 - 62822 (+)
Type: TC
Location: 61479 - 62822 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium pullorum_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003069_14_38 | vegan > omnivore | 2.34251 | 0.02059 |
| MGYG000003069_14_38 | vegetarian > omnivore | 1.39717 | 0.01285 |