Cluster: MGYG000003069_CGC24
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003069
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003069_13 | MGYG000003069_13_44 | 50932 | 52920 | - | GH120 |
| TC | MGYG000003069_13 | MGYG000003069_13_45 | 53348 | 53989 | + | 3.A.1.31.1 |
| TC | MGYG000003069_13 | MGYG000003069_13_46 | 54004 | 54762 | + | 3.A.1.31.1 |
| TC | MGYG000003069_13 | MGYG000003069_13_47 | 54759 | 56360 | + | 3.A.1.31.1 |
| TC | MGYG000003069_13 | MGYG000003069_13_48 | 56441 | 57217 | - | 3.A.1.5.1 |
| TC | MGYG000003069_13 | MGYG000003069_13_49 | 57220 | 58074 | - | 3.A.1.5.10 |
| TC | MGYG000003069_13 | MGYG000003069_13_50 | 58064 | 58969 | - | 3.A.1.5.3 |
| TC | MGYG000003069_13 | MGYG000003069_13_51 | 58966 | 59943 | - | 3.A.1.5.38 |
| TC | MGYG000003069_13 | MGYG000003069_13_52 | 59947 | 61584 | - | 3.A.1.5.39 |
| pfam | MGYG000003069_13 | MGYG000003069_13_53 | 61709 | 62473 | + | Pan_kinase |
| STP | MGYG000003069_13 | MGYG000003069_13_54 | 62553 | 63986 | - | SBP_bac_1 |
| TC | MGYG000003069_13 | MGYG000003069_13_55 | 64230 | 65588 | - | 3.A.1.1.34 |
| CAZyme | MGYG000003069_13 | MGYG000003069_13_56 | 65801 | 67396 | + | GH51_1 |
| CAZyme | MGYG000003069_13 | MGYG000003069_13_57 | 67533 | 69608 | - | GH42 |
Gene ID: MGYG000003069_13_44
Type: CAZyme
Location: 50932 - 52920 (-)
Type: CAZyme
Location: 50932 - 52920 (-)
Gene ID: MGYG000003069_13_45
Type: TC
Location: 53348 - 53989 (+)
Type: TC
Location: 53348 - 53989 (+)
Gene ID: MGYG000003069_13_46
Type: TC
Location: 54004 - 54762 (+)
Type: TC
Location: 54004 - 54762 (+)
Gene ID: MGYG000003069_13_47
Type: TC
Location: 54759 - 56360 (+)
Type: TC
Location: 54759 - 56360 (+)
Gene ID: MGYG000003069_13_48
Type: TC
Location: 56441 - 57217 (-)
Type: TC
Location: 56441 - 57217 (-)
Gene ID: MGYG000003069_13_49
Type: TC
Location: 57220 - 58074 (-)
Type: TC
Location: 57220 - 58074 (-)
Gene ID: MGYG000003069_13_50
Type: TC
Location: 58064 - 58969 (-)
Type: TC
Location: 58064 - 58969 (-)
Gene ID: MGYG000003069_13_51
Type: TC
Location: 58966 - 59943 (-)
Type: TC
Location: 58966 - 59943 (-)
Gene ID: MGYG000003069_13_52
Type: TC
Location: 59947 - 61584 (-)
Type: TC
Location: 59947 - 61584 (-)
Gene ID: MGYG000003069_13_53
Type: pfam
Location: 61709 - 62473 (+)
Type: pfam
Location: 61709 - 62473 (+)
Gene ID: MGYG000003069_13_54
Type: STP
Location: 62553 - 63986 (-)
Type: STP
Location: 62553 - 63986 (-)
Gene ID: MGYG000003069_13_55
Type: TC
Location: 64230 - 65588 (-)
Type: TC
Location: 64230 - 65588 (-)
Gene ID: MGYG000003069_13_56
Type: CAZyme
Location: 65801 - 67396 (+)
Type: CAZyme
Location: 65801 - 67396 (+)
Gene ID: MGYG000003069_13_57
Type: CAZyme
Location: 67533 - 69608 (-)
Type: CAZyme
Location: 67533 - 69608 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium pullorum_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003069_13_55 | vegan > omnivore | 1.27537 | 0.02059 |
| MGYG000003069_13_55 | vegetarian > omnivore | 1.04757 | 0.01285 |