Cluster: MGYG000003069_CGC17
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003069
- CGC Family ID: CGCFAM_01326
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003069_8 | MGYG000003069_8_1 | 88 | 1752 | - | GH13_30 |
| TC | MGYG000003069_8 | MGYG000003069_8_2 | 1897 | 2721 | - | 3.A.1.1.24 |
| TC | MGYG000003069_8 | MGYG000003069_8_3 | 2723 | 3664 | - | 3.A.1.1.37 |
| STP | MGYG000003069_8 | MGYG000003069_8_4 | 3671 | 5008 | - | SBP_bac_1 |
| TF | MGYG000003069_8 | MGYG000003069_8_5 | 5333 | 6355 | + | LacI |
| TC | MGYG000003069_8 | MGYG000003069_8_6 | 6649 | 7524 | - | 3.A.1.1.28 |
| TC | MGYG000003069_8 | MGYG000003069_8_7 | 7524 | 8423 | - | 3.A.1.1.28 |
| STP | MGYG000003069_8 | MGYG000003069_8_8 | 8433 | 9752 | - | SBP_bac_1 |
| pfam | MGYG000003069_8 | MGYG000003069_8_9 | 9945 | 11159 | + | ROK |
| CAZyme | MGYG000003069_8 | MGYG000003069_8_10 | 11300 | 13516 | - | GH36 |
| pfam | MGYG000003069_8 | MGYG000003069_8_11 | 13711 | 14163 | - | dCMP_cyt_deam_1 | MafB19-deam |
| TC | MGYG000003069_8 | MGYG000003069_8_12 | 14383 | 16458 | + | 2.A.36.3.1 |
| peptidase | MGYG000003069_8 | MGYG000003069_8_13 | 16465 | 17223 | - | S09.UPW |
| pfam | MGYG000003069_8 | MGYG000003069_8_14 | 17698 | 18279 | + | dUTPase | DCD_N | DCD_C | DCD |
| TC | MGYG000003069_8 | MGYG000003069_8_15 | 18425 | 21391 | - | 3.A.3.2.21 |
Gene ID: MGYG000003069_8_1
Type: CAZyme
Location: 88 - 1752 (-)
Type: CAZyme
Location: 88 - 1752 (-)
Gene ID: MGYG000003069_8_2
Type: TC
Location: 1897 - 2721 (-)
Type: TC
Location: 1897 - 2721 (-)
Gene ID: MGYG000003069_8_3
Type: TC
Location: 2723 - 3664 (-)
Type: TC
Location: 2723 - 3664 (-)
Gene ID: MGYG000003069_8_4
Type: STP
Location: 3671 - 5008 (-)
Type: STP
Location: 3671 - 5008 (-)
Gene ID: MGYG000003069_8_5
Type: TF
Location: 5333 - 6355 (+)
Type: TF
Location: 5333 - 6355 (+)
Gene ID: MGYG000003069_8_6
Type: TC
Location: 6649 - 7524 (-)
Type: TC
Location: 6649 - 7524 (-)
Gene ID: MGYG000003069_8_7
Type: TC
Location: 7524 - 8423 (-)
Type: TC
Location: 7524 - 8423 (-)
Gene ID: MGYG000003069_8_8
Type: STP
Location: 8433 - 9752 (-)
Type: STP
Location: 8433 - 9752 (-)
Gene ID: MGYG000003069_8_9
Type: pfam
Location: 9945 - 11159 (+)
Type: pfam
Location: 9945 - 11159 (+)
Gene ID: MGYG000003069_8_10
Type: CAZyme
Location: 11300 - 13516 (-)
Type: CAZyme
Location: 11300 - 13516 (-)
Gene ID: MGYG000003069_8_11
Type: pfam
Location: 13711 - 14163 (-)
Type: pfam
Location: 13711 - 14163 (-)
Gene ID: MGYG000003069_8_12
Type: TC
Location: 14383 - 16458 (+)
Type: TC
Location: 14383 - 16458 (+)
Gene ID: MGYG000003069_8_13
Type: peptidase
Location: 16465 - 17223 (-)
Type: peptidase
Location: 16465 - 17223 (-)
Gene ID: MGYG000003069_8_14
Type: pfam
Location: 17698 - 18279 (+)
Type: pfam
Location: 17698 - 18279 (+)
Gene ID: MGYG000003069_8_15
Type: TC
Location: 18425 - 21391 (-)
Type: TC
Location: 18425 - 21391 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Bifidobacteriaceae
Genus
Bifidobacterium
Species
Bifidobacterium pullorum_B
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.