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Cluster: MGYG000003065_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003065_4 MGYG000003065_4_27 26481 27521 + 2.A.56.1.5
TC MGYG000003065_4 MGYG000003065_4_28 27521 27988 + 2.A.56.1.6
TC MGYG000003065_4 MGYG000003065_4_29 27989 29296 + 2.A.56.1.5
TF MGYG000003065_4 MGYG000003065_4_30 29271 30176 - HTH_AraC | HTH_AraC
CAZyme MGYG000003065_4 MGYG000003065_4_31 30270 31409 + GH105
TF MGYG000003065_4 MGYG000003065_4_32 31730 32434 + GntR
pfam MGYG000003065_4 MGYG000003065_4_33 32523 32954 + EIIA-man
TC MGYG000003065_4 MGYG000003065_4_34 32979 33770 + 4.A.6.1.13
TC MGYG000003065_4 MGYG000003065_4_35 33763 34551 + 4.A.6.1.13
TC MGYG000003065_4 MGYG000003065_4_36 34586 35062 + 4.A.6.1.13
CAZyme MGYG000003065_4 MGYG000003065_4_37 35132 36253 + GH88
CAZyme MGYG000003065_4 MGYG000003065_4_38 36275 38047 + GH35
Gene ID: MGYG000003065_4_27
Type: TC
Location: 26481 - 27521 (+)
Gene ID: MGYG000003065_4_28
Type: TC
Location: 27521 - 27988 (+)
Gene ID: MGYG000003065_4_29
Type: TC
Location: 27989 - 29296 (+)
Gene ID: MGYG000003065_4_30
Type: TF
Location: 29271 - 30176 (-)
Gene ID: MGYG000003065_4_31
Type: CAZyme
Location: 30270 - 31409 (+)
Gene ID: MGYG000003065_4_32
Type: TF
Location: 31730 - 32434 (+)
Gene ID: MGYG000003065_4_33
Type: pfam
Location: 32523 - 32954 (+)
Gene ID: MGYG000003065_4_34
Type: TC
Location: 32979 - 33770 (+)
Gene ID: MGYG000003065_4_35
Type: TC
Location: 33763 - 34551 (+)
Gene ID: MGYG000003065_4_36
Type: TC
Location: 34586 - 35062 (+)
Gene ID: MGYG000003065_4_37
Type: CAZyme
Location: 35132 - 36253 (+)
Gene ID: MGYG000003065_4_38
Type: CAZyme
Location: 36275 - 38047 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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