Cluster: MGYG000003065_CGC5
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003065
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003065_3 | MGYG000003065_3_49 | 49448 | 49765 | - | 4.A.3.2.4 |
| TC | MGYG000003065_3 | MGYG000003065_3_50 | 49785 | 51098 | - | 4.A.3.2.2 |
| TC | MGYG000003065_3 | MGYG000003065_3_51 | 51136 | 51450 | - | 4.A.3.2.2 |
| CAZyme | MGYG000003065_3 | MGYG000003065_3_52 | 51478 | 52914 | - | GH1 |
| CAZyme | MGYG000003065_3 | MGYG000003065_3_53 | 52928 | 54010 | - | GH5_44 |
| TF | MGYG000003065_3 | MGYG000003065_3_54 | 54239 | 55099 | - | HTH_6 |
| TC | MGYG000003065_3 | MGYG000003065_3_55 | 55242 | 57110 | - | 3.A.16.1.2 |
| pfam | MGYG000003065_3 | MGYG000003065_3_56 | 57222 | 57953 | - | Aldolase_II |
| TC | MGYG000003065_3 | MGYG000003065_3_57 | 58076 | 59470 | - | 2.A.25.1.5 |
| NULL(UNKNOWN) | MGYG000003065_3 | MGYG000003065_3_58 | 59670 | 60203 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000003065_3 | MGYG000003065_3_59 | 60194 | 60835 | - | DnaJ |
| TC | MGYG000003065_3 | MGYG000003065_3_60 | 60816 | 61673 | - | 1.E.12.1.3 |
Gene ID: MGYG000003065_3_49
Type: TC
Location: 49448 - 49765 (-)
Type: TC
Location: 49448 - 49765 (-)
Gene ID: MGYG000003065_3_50
Type: TC
Location: 49785 - 51098 (-)
Type: TC
Location: 49785 - 51098 (-)
Gene ID: MGYG000003065_3_51
Type: TC
Location: 51136 - 51450 (-)
Type: TC
Location: 51136 - 51450 (-)
Gene ID: MGYG000003065_3_52
Type: CAZyme
Location: 51478 - 52914 (-)
Type: CAZyme
Location: 51478 - 52914 (-)
Gene ID: MGYG000003065_3_53
Type: CAZyme
Location: 52928 - 54010 (-)
Type: CAZyme
Location: 52928 - 54010 (-)
Gene ID: MGYG000003065_3_54
Type: TF
Location: 54239 - 55099 (-)
Type: TF
Location: 54239 - 55099 (-)
Gene ID: MGYG000003065_3_55
Type: TC
Location: 55242 - 57110 (-)
Type: TC
Location: 55242 - 57110 (-)
Gene ID: MGYG000003065_3_56
Type: pfam
Location: 57222 - 57953 (-)
Type: pfam
Location: 57222 - 57953 (-)
Gene ID: MGYG000003065_3_57
Type: TC
Location: 58076 - 59470 (-)
Type: TC
Location: 58076 - 59470 (-)
Gene ID: MGYG000003065_3_58
Type:
Location: 59670 - 60203 (-)
Type:
Location: 59670 - 60203 (-)
Gene ID: MGYG000003065_3_59
Type: pfam
Location: 60194 - 60835 (-)
Type: pfam
Location: 60194 - 60835 (-)
Gene ID: MGYG000003065_3_60
Type: TC
Location: 60816 - 61673 (-)
Type: TC
Location: 60816 - 61673 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B sp900544395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.