Cluster: MGYG000003065_CGC43
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003065
- CGC Family ID: CGCFAM_00039
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003065_54 | MGYG000003065_54_1 | 153 | 1559 | + | 9.B.18.1.1 |
| pfam | MGYG000003065_54 | MGYG000003065_54_2 | 1574 | 2656 | + | LytR_cpsA_psr |
| NULL(UNKNOWN) | MGYG000003065_54 | MGYG000003065_54_3 | 2673 | 4004 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003065_54 | MGYG000003065_54_4 | 3991 | 4917 | + | GT2 |
Gene ID: MGYG000003065_54_1
Type: TC
Location: 153 - 1559 (+)
Type: TC
Location: 153 - 1559 (+)
Gene ID: MGYG000003065_54_2
Type: pfam
Location: 1574 - 2656 (+)
Type: pfam
Location: 1574 - 2656 (+)
Gene ID: MGYG000003065_54_3
Type:
Location: 2673 - 4004 (+)
Type:
Location: 2673 - 4004 (+)
Gene ID: MGYG000003065_54_4
Type: CAZyme
Location: 3991 - 4917 (+)
Type: CAZyme
Location: 3991 - 4917 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B sp900544395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.