Cluster: MGYG000003065_CGC39
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003065
- CGC Family ID: CGCFAM_10908
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003065_44 | MGYG000003065_44_11 | 8642 | 9130 | + | 4.A.1.2.11 |
| TC | MGYG000003065_44 | MGYG000003065_44_12 | 9224 | 10681 | + | 4.A.1.1.7 |
| TC | MGYG000003065_44 | MGYG000003065_44_13 | 10867 | 11610 | + | 9.B.158.1.1 |
| pfam | MGYG000003065_44 | MGYG000003065_44_14 | 12020 | 13243 | + | tRNA-synt_1b | S4 | SYY_C-terminal |
| CAZyme | MGYG000003065_44 | MGYG000003065_44_15 | 13285 | 14610 | - | GH13_20 |
Gene ID: MGYG000003065_44_11
Type: TC
Location: 8642 - 9130 (+)
Type: TC
Location: 8642 - 9130 (+)
Gene ID: MGYG000003065_44_12
Type: TC
Location: 9224 - 10681 (+)
Type: TC
Location: 9224 - 10681 (+)
Gene ID: MGYG000003065_44_13
Type: TC
Location: 10867 - 11610 (+)
Type: TC
Location: 10867 - 11610 (+)
Gene ID: MGYG000003065_44_14
Type: pfam
Location: 12020 - 13243 (+)
Type: pfam
Location: 12020 - 13243 (+)
Gene ID: MGYG000003065_44_15
Type: CAZyme
Location: 13285 - 14610 (-)
Type: CAZyme
Location: 13285 - 14610 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B sp900544395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.