Cluster: MGYG000003065_CGC29
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003065
- CGC Family ID: CGCFAM_10906
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003065_22 | MGYG000003065_22_11 | 8724 | 15329 | - | GH95 |
| pfam | MGYG000003065_22 | MGYG000003065_22_12 | 15648 | 16304 | - | ABC2_membrane_5 |
| TC | MGYG000003065_22 | MGYG000003065_22_13 | 16301 | 17164 | - | 3.A.1.149.1 |
| TF | MGYG000003065_22 | MGYG000003065_22_14 | 17164 | 17544 | - | GntR |
| pfam | MGYG000003065_22 | MGYG000003065_22_15 | 17689 | 18966 | - | Enolase_C | Enolase_N | MR_MLE_C |
| TC | MGYG000003065_22 | MGYG000003065_22_16 | 19081 | 19923 | + | 2.A.115.1.5 |
| TC | MGYG000003065_22 | MGYG000003065_22_17 | 19952 | 22144 | + | 3.A.7.7.1 |
Gene ID: MGYG000003065_22_11
Type: CAZyme
Location: 8724 - 15329 (-)
Type: CAZyme
Location: 8724 - 15329 (-)
Gene ID: MGYG000003065_22_12
Type: pfam
Location: 15648 - 16304 (-)
Type: pfam
Location: 15648 - 16304 (-)
Gene ID: MGYG000003065_22_13
Type: TC
Location: 16301 - 17164 (-)
Type: TC
Location: 16301 - 17164 (-)
Gene ID: MGYG000003065_22_14
Type: TF
Location: 17164 - 17544 (-)
Type: TF
Location: 17164 - 17544 (-)
Gene ID: MGYG000003065_22_15
Type: pfam
Location: 17689 - 18966 (-)
Type: pfam
Location: 17689 - 18966 (-)
Gene ID: MGYG000003065_22_16
Type: TC
Location: 19081 - 19923 (+)
Type: TC
Location: 19081 - 19923 (+)
Gene ID: MGYG000003065_22_17
Type: TC
Location: 19952 - 22144 (+)
Type: TC
Location: 19952 - 22144 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B sp900544395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.