Cluster: MGYG000003065_CGC28
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate: alpha-glucan
- Genome ID: MGYG000003065
- CGC Family ID: CGCFAM_00174
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003065_19 | MGYG000003065_19_40 | 36846 | 38180 | + | 2.A.40.2.1 |
| CAZyme | MGYG000003065_19 | MGYG000003065_19_41 | 38261 | 39667 | - | GH32 |
| TC | MGYG000003065_19 | MGYG000003065_19_42 | 39679 | 41568 | - | 4.A.1.2.1 |
| TF | MGYG000003065_19 | MGYG000003065_19_43 | 41703 | 42662 | - | LacI |
| TC | MGYG000003065_19 | MGYG000003065_19_44 | 42802 | 43995 | - | 2.A.23.2.2 |
Gene ID: MGYG000003065_19_40
Type: TC
Location: 36846 - 38180 (+)
Type: TC
Location: 36846 - 38180 (+)
Gene ID: MGYG000003065_19_41
Type: CAZyme
Location: 38261 - 39667 (-)
Type: CAZyme
Location: 38261 - 39667 (-)
Gene ID: MGYG000003065_19_42
Type: TC
Location: 39679 - 41568 (-)
Type: TC
Location: 39679 - 41568 (-)
Gene ID: MGYG000003065_19_43
Type: TF
Location: 41703 - 42662 (-)
Type: TF
Location: 41703 - 42662 (-)
Gene ID: MGYG000003065_19_44
Type: TC
Location: 42802 - 43995 (-)
Type: TC
Location: 42802 - 43995 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B sp900544395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.