Cluster: MGYG000003065_CGC20
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003065
- CGC Family ID: CGCFAM_03406
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003065_11 | MGYG000003065_11_7 | 6077 | 8239 | + | GH112 |
| TF | MGYG000003065_11 | MGYG000003065_11_8 | 8346 | 9176 | - | HTH_AraC |
| TC | MGYG000003065_11 | MGYG000003065_11_9 | 9277 | 9831 | - | 2.A.51.1.6 |
| TC | MGYG000003065_11 | MGYG000003065_11_10 | 9828 | 10394 | - | 2.A.51.1.6 |
| TC | MGYG000003065_11 | MGYG000003065_11_11 | 10569 | 11315 | + | 3.A.1.25.6 |
Gene ID: MGYG000003065_11_7
Type: CAZyme
Location: 6077 - 8239 (+)
Type: CAZyme
Location: 6077 - 8239 (+)
Gene ID: MGYG000003065_11_8
Type: TF
Location: 8346 - 9176 (-)
Type: TF
Location: 8346 - 9176 (-)
Gene ID: MGYG000003065_11_9
Type: TC
Location: 9277 - 9831 (-)
Type: TC
Location: 9277 - 9831 (-)
Gene ID: MGYG000003065_11_10
Type: TC
Location: 9828 - 10394 (-)
Type: TC
Location: 9828 - 10394 (-)
Gene ID: MGYG000003065_11_11
Type: TC
Location: 10569 - 11315 (+)
Type: TC
Location: 10569 - 11315 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B sp900544395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.