Cluster: MGYG000003065_CGC19
🧬 Cluster Details
- Gene Count: 15
- CAZyme Count: 9
- Substrate:
- Genome ID: MGYG000003065
- CGC Family ID: CGCFAM_00284
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003065_10 | MGYG000003065_10_42 | 46812 | 47765 | - | GT2 |
| CAZyme | MGYG000003065_10 | MGYG000003065_10_43 | 47762 | 48514 | - | GT32 |
| pfam | MGYG000003065_10 | MGYG000003065_10_44 | 48560 | 49777 | - | Amino_oxidase | NAD_binding_8 |
| CAZyme | MGYG000003065_10 | MGYG000003065_10_45 | 49774 | 50874 | - | GT4 |
| CAZyme | MGYG000003065_10 | MGYG000003065_10_46 | 50907 | 51716 | - | GT26 |
| NULL(UNKNOWN) | MGYG000003065_10 | MGYG000003065_10_47 | 51735 | 52991 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | MGYG000003065_10 | MGYG000003065_10_48 | 52988 | 54190 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003065_10 | MGYG000003065_10_49 | 54233 | 55690 | - | 2.A.66.2.16 |
| CAZyme | MGYG000003065_10 | MGYG000003065_10_50 | 55691 | 56704 | - | GT2 |
| CAZyme | MGYG000003065_10 | MGYG000003065_10_51 | 56704 | 57732 | - | GT2 |
| CAZyme | MGYG000003065_10 | MGYG000003065_10_52 | 57717 | 58829 | - | GT4 |
| pfam | MGYG000003065_10 | MGYG000003065_10_53 | 58845 | 60236 | - | Wzy_C |
| CAZyme | MGYG000003065_10 | MGYG000003065_10_54 | 60243 | 61334 | - | GT2 |
| CAZyme | MGYG000003065_10 | MGYG000003065_10_55 | 61310 | 62557 | - | GT4 |
| TC | MGYG000003065_10 | MGYG000003065_10_56 | 62579 | 63274 | - | 9.B.18.1.3 |
Gene ID: MGYG000003065_10_42
Type: CAZyme
Location: 46812 - 47765 (-)
Type: CAZyme
Location: 46812 - 47765 (-)
Gene ID: MGYG000003065_10_43
Type: CAZyme
Location: 47762 - 48514 (-)
Type: CAZyme
Location: 47762 - 48514 (-)
Gene ID: MGYG000003065_10_44
Type: pfam
Location: 48560 - 49777 (-)
Type: pfam
Location: 48560 - 49777 (-)
Gene ID: MGYG000003065_10_45
Type: CAZyme
Location: 49774 - 50874 (-)
Type: CAZyme
Location: 49774 - 50874 (-)
Gene ID: MGYG000003065_10_46
Type: CAZyme
Location: 50907 - 51716 (-)
Type: CAZyme
Location: 50907 - 51716 (-)
Gene ID: MGYG000003065_10_47
Type:
Location: 51735 - 52991 (-)
Type:
Location: 51735 - 52991 (-)
Gene ID: MGYG000003065_10_48
Type:
Location: 52988 - 54190 (-)
Type:
Location: 52988 - 54190 (-)
Gene ID: MGYG000003065_10_49
Type: TC
Location: 54233 - 55690 (-)
Type: TC
Location: 54233 - 55690 (-)
Gene ID: MGYG000003065_10_50
Type: CAZyme
Location: 55691 - 56704 (-)
Type: CAZyme
Location: 55691 - 56704 (-)
Gene ID: MGYG000003065_10_51
Type: CAZyme
Location: 56704 - 57732 (-)
Type: CAZyme
Location: 56704 - 57732 (-)
Gene ID: MGYG000003065_10_52
Type: CAZyme
Location: 57717 - 58829 (-)
Type: CAZyme
Location: 57717 - 58829 (-)
Gene ID: MGYG000003065_10_53
Type: pfam
Location: 58845 - 60236 (-)
Type: pfam
Location: 58845 - 60236 (-)
Gene ID: MGYG000003065_10_54
Type: CAZyme
Location: 60243 - 61334 (-)
Type: CAZyme
Location: 60243 - 61334 (-)
Gene ID: MGYG000003065_10_55
Type: CAZyme
Location: 61310 - 62557 (-)
Type: CAZyme
Location: 61310 - 62557 (-)
Gene ID: MGYG000003065_10_56
Type: TC
Location: 62579 - 63274 (-)
Type: TC
Location: 62579 - 63274 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B sp900544395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.