Cluster: MGYG000003065_CGC14
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003065
- CGC Family ID: CGCFAM_01878
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003065_7 | MGYG000003065_7_24 | 25534 | 31356 | - | CBM32 |
| NULL(UNKNOWN) | MGYG000003065_7 | MGYG000003065_7_25 | 31674 | 31985 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003065_7 | MGYG000003065_7_26 | 31990 | 33036 | + | 3.A.2.3.1 |
| TC | MGYG000003065_7 | MGYG000003065_7_27 | 33033 | 34982 | + | 3.A.2.3.3 |
| TC | MGYG000003065_7 | MGYG000003065_7_28 | 34998 | 35432 | + | 3.A.2.2.1 |
| pfam | MGYG000003065_7 | MGYG000003065_7_29 | 35440 | 35742 | + | ATP-synt_F |
| pfam | MGYG000003065_7 | MGYG000003065_7_30 | 35772 | 36359 | + | vATP-synt_E |
| TC | MGYG000003065_7 | MGYG000003065_7_31 | 36352 | 38118 | + | 3.A.2.3.2 |
| TC | MGYG000003065_7 | MGYG000003065_7_32 | 38134 | 39567 | + | 3.A.2.3.2 |
| TC | MGYG000003065_7 | MGYG000003065_7_33 | 39580 | 40209 | + | 3.A.2.3.2 |
| NULL(UNKNOWN) | MGYG000003065_7 | MGYG000003065_7_34 | 40347 | 41735 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003065_7 | MGYG000003065_7_35 | 41763 | 43250 | - | 3.A.1.2.20 |
| TC | MGYG000003065_7 | MGYG000003065_7_36 | 43255 | 44229 | - | 3.A.1.2.20 |
Gene ID: MGYG000003065_7_24
Type: CAZyme
Location: 25534 - 31356 (-)
Type: CAZyme
Location: 25534 - 31356 (-)
Gene ID: MGYG000003065_7_25
Type:
Location: 31674 - 31985 (+)
Type:
Location: 31674 - 31985 (+)
Gene ID: MGYG000003065_7_26
Type: TC
Location: 31990 - 33036 (+)
Type: TC
Location: 31990 - 33036 (+)
Gene ID: MGYG000003065_7_27
Type: TC
Location: 33033 - 34982 (+)
Type: TC
Location: 33033 - 34982 (+)
Gene ID: MGYG000003065_7_28
Type: TC
Location: 34998 - 35432 (+)
Type: TC
Location: 34998 - 35432 (+)
Gene ID: MGYG000003065_7_29
Type: pfam
Location: 35440 - 35742 (+)
Type: pfam
Location: 35440 - 35742 (+)
Gene ID: MGYG000003065_7_30
Type: pfam
Location: 35772 - 36359 (+)
Type: pfam
Location: 35772 - 36359 (+)
Gene ID: MGYG000003065_7_31
Type: TC
Location: 36352 - 38118 (+)
Type: TC
Location: 36352 - 38118 (+)
Gene ID: MGYG000003065_7_32
Type: TC
Location: 38134 - 39567 (+)
Type: TC
Location: 38134 - 39567 (+)
Gene ID: MGYG000003065_7_33
Type: TC
Location: 39580 - 40209 (+)
Type: TC
Location: 39580 - 40209 (+)
Gene ID: MGYG000003065_7_34
Type:
Location: 40347 - 41735 (-)
Type:
Location: 40347 - 41735 (-)
Gene ID: MGYG000003065_7_35
Type: TC
Location: 41763 - 43250 (-)
Type: TC
Location: 41763 - 43250 (-)
Gene ID: MGYG000003065_7_36
Type: TC
Location: 43255 - 44229 (-)
Type: TC
Location: 43255 - 44229 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B sp900544395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.