Cluster: MGYG000003065_CGC13
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003065
- CGC Family ID: CGCFAM_04114
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003065_7 | MGYG000003065_7_5 | 2555 | 4321 | - | 8.A.59.2.1 |
| CAZyme | MGYG000003065_7 | MGYG000003065_7_6 | 4359 | 7001 | - | CBM67 | GH78 |
| pfam | MGYG000003065_7 | MGYG000003065_7_7 | 7006 | 7806 | - | BKACE |
| CAZyme | MGYG000003065_7 | MGYG000003065_7_8 | 7819 | 11136 | - | GH127 |
| pfam | MGYG000003065_7 | MGYG000003065_7_9 | 11130 | 11828 | - | Asp_Glu_race |
| pfam | MGYG000003065_7 | MGYG000003065_7_10 | 11835 | 13379 | - | Cellulase | Apiosidase | DUF5060 | DUF5605 |
| CAZyme | MGYG000003065_7 | MGYG000003065_7_11 | 13383 | 14930 | - | CBM91 | GH43_11 |
| CAZyme | MGYG000003065_7 | MGYG000003065_7_12 | 14944 | 16233 | - | GH175 |
| TC | MGYG000003065_7 | MGYG000003065_7_13 | 16217 | 17044 | - | 3.A.1.1.46 |
| TC | MGYG000003065_7 | MGYG000003065_7_14 | 17047 | 17928 | - | 3.A.1.1.37 |
| STP | MGYG000003065_7 | MGYG000003065_7_15 | 18019 | 19368 | - | SBP_bac_1 |
| TC | MGYG000003065_7 | MGYG000003065_7_16 | 19689 | 21029 | - | 2.A.8.1.4 |
Gene ID: MGYG000003065_7_5
Type: TC
Location: 2555 - 4321 (-)
Type: TC
Location: 2555 - 4321 (-)
Gene ID: MGYG000003065_7_6
Type: CAZyme
Location: 4359 - 7001 (-)
Type: CAZyme
Location: 4359 - 7001 (-)
Gene ID: MGYG000003065_7_7
Type: pfam
Location: 7006 - 7806 (-)
Type: pfam
Location: 7006 - 7806 (-)
Gene ID: MGYG000003065_7_8
Type: CAZyme
Location: 7819 - 11136 (-)
Type: CAZyme
Location: 7819 - 11136 (-)
Gene ID: MGYG000003065_7_9
Type: pfam
Location: 11130 - 11828 (-)
Type: pfam
Location: 11130 - 11828 (-)
Gene ID: MGYG000003065_7_10
Type: pfam
Location: 11835 - 13379 (-)
Type: pfam
Location: 11835 - 13379 (-)
Gene ID: MGYG000003065_7_11
Type: CAZyme
Location: 13383 - 14930 (-)
Type: CAZyme
Location: 13383 - 14930 (-)
Gene ID: MGYG000003065_7_12
Type: CAZyme
Location: 14944 - 16233 (-)
Type: CAZyme
Location: 14944 - 16233 (-)
Gene ID: MGYG000003065_7_13
Type: TC
Location: 16217 - 17044 (-)
Type: TC
Location: 16217 - 17044 (-)
Gene ID: MGYG000003065_7_14
Type: TC
Location: 17047 - 17928 (-)
Type: TC
Location: 17047 - 17928 (-)
Gene ID: MGYG000003065_7_15
Type: STP
Location: 18019 - 19368 (-)
Type: STP
Location: 18019 - 19368 (-)
Gene ID: MGYG000003065_7_16
Type: TC
Location: 19689 - 21029 (-)
Type: TC
Location: 19689 - 21029 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Ruminococcus_B
Species
Ruminococcus_B sp900544395
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.