Cluster: MGYG000003064_CGC47
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000003064
- CGC Family ID: CGCFAM_00158
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003064_7 | MGYG000003064_7_72 | 95213 | 96541 | - | 1.B.3.1.7 |
| TF | MGYG000003064_7 | MGYG000003064_7_73 | 96669 | 101141 | - | HTH_AraC |
| CAZyme | MGYG000003064_7 | MGYG000003064_7_74 | 101167 | 103182 | - | CE19 |
| CAZyme | MGYG000003064_7 | MGYG000003064_7_75 | 103183 | 105573 | - | GH31_9 |
| pfam | MGYG000003064_7 | MGYG000003064_7_76 | 105593 | 107410 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000003064_7 | MGYG000003064_7_77 | 107429 | 110707 | - | 1.B.14.6.1 |
| CAZyme | MGYG000003064_7 | MGYG000003064_7_78 | 110739 | 111917 | - | GH105 |
| CAZyme | MGYG000003064_7 | MGYG000003064_7_79 | 112141 | 113454 | + | CE7 |
| TC | MGYG000003064_7 | MGYG000003064_7_80 | 113689 | 116682 | + | 1.B.14.6.1 |
| pfam | MGYG000003064_7 | MGYG000003064_7_81 | 116693 | 118225 | + | SusD_RagB | SusD-like_3 |
| CAZyme | MGYG000003064_7 | MGYG000003064_7_82 | 118249 | 119388 | + | CE19 |
Gene ID: MGYG000003064_7_72
Type: TC
Location: 95213 - 96541 (-)
Type: TC
Location: 95213 - 96541 (-)
Gene ID: MGYG000003064_7_73
Type: TF
Location: 96669 - 101141 (-)
Type: TF
Location: 96669 - 101141 (-)
Gene ID: MGYG000003064_7_74
Type: CAZyme
Location: 101167 - 103182 (-)
Type: CAZyme
Location: 101167 - 103182 (-)
Gene ID: MGYG000003064_7_75
Type: CAZyme
Location: 103183 - 105573 (-)
Type: CAZyme
Location: 103183 - 105573 (-)
Gene ID: MGYG000003064_7_76
Type: pfam
Location: 105593 - 107410 (-)
Type: pfam
Location: 105593 - 107410 (-)
Gene ID: MGYG000003064_7_77
Type: TC
Location: 107429 - 110707 (-)
Type: TC
Location: 107429 - 110707 (-)
Gene ID: MGYG000003064_7_78
Type: CAZyme
Location: 110739 - 111917 (-)
Type: CAZyme
Location: 110739 - 111917 (-)
Gene ID: MGYG000003064_7_79
Type: CAZyme
Location: 112141 - 113454 (+)
Type: CAZyme
Location: 112141 - 113454 (+)
Gene ID: MGYG000003064_7_80
Type: TC
Location: 113689 - 116682 (+)
Type: TC
Location: 113689 - 116682 (+)
Gene ID: MGYG000003064_7_81
Type: pfam
Location: 116693 - 118225 (+)
Type: pfam
Location: 116693 - 118225 (+)
Gene ID: MGYG000003064_7_82
Type: CAZyme
Location: 118249 - 119388 (+)
Type: CAZyme
Location: 118249 - 119388 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides_I
Species
Bacteroides_I graminisolvens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.