Cluster: MGYG000003064_CGC44
🧬 Cluster Details
- Gene Count: 19
- CAZyme Count: 9
- Substrate: beta-mannan/xylan/beta-glucan
- Genome ID: MGYG000003064
- CGC Family ID: CGCFAM_00044
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003064_6 | MGYG000003064_6_134 | 163880 | 165886 | + | GH13_14 |
| TF | MGYG000003064_6 | MGYG000003064_6_135 | 165951 | 170126 | - | HTH_AraC |
| TC | MGYG000003064_6 | MGYG000003064_6_136 | 170501 | 173674 | + | 1.B.14.6.1 |
| pfam | MGYG000003064_6 | MGYG000003064_6_137 | 173691 | 175325 | + | SusD_RagB | SusD-like_3 |
| pfam | MGYG000003064_6 | MGYG000003064_6_138 | 175342 | 176760 | + | SGBP_B_XBD |
| CAZyme | MGYG000003064_6 | MGYG000003064_6_139 | 176785 | 179004 | + | GH10 |
| NULL(UNKNOWN) | MGYG000003064_6 | MGYG000003064_6_140 | 178982 | 179113 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003064_6 | MGYG000003064_6_141 | 179184 | 180401 | + | CE15 |
| pfam | MGYG000003064_6 | MGYG000003064_6_142 | 180563 | 181423 | + | Lin1244_N |
| TF | MGYG000003064_6 | MGYG000003064_6_143 | 181781 | 182638 | + | HTH_AraC | HTH_AraC |
| TC | MGYG000003064_6 | MGYG000003064_6_144 | 182869 | 185949 | + | 1.B.14.6.1 |
| pfam | MGYG000003064_6 | MGYG000003064_6_145 | 185969 | 187918 | + | SusD_RagB | SusD-like_3 |
| CAZyme | MGYG000003064_6 | MGYG000003064_6_146 | 188013 | 189728 | + | GH35 |
| TC | MGYG000003064_6 | MGYG000003064_6_147 | 189889 | 191373 | + | 2.A.2.3.4 |
| CAZyme | MGYG000003064_6 | MGYG000003064_6_148 | 191393 | 192532 | + | GH10 |
| CAZyme | MGYG000003064_6 | MGYG000003064_6_149 | 192549 | 195092 | + | GH115 |
| CAZyme | MGYG000003064_6 | MGYG000003064_6_150 | 195210 | 196184 | + | GH43_1 |
| CAZyme | MGYG000003064_6 | MGYG000003064_6_151 | 196256 | 197239 | + | GH109 |
| CAZyme | MGYG000003064_6 | MGYG000003064_6_152 | 197272 | 199332 | + | GH67 |
Gene ID: MGYG000003064_6_134
Type: CAZyme
Location: 163880 - 165886 (+)
Type: CAZyme
Location: 163880 - 165886 (+)
Gene ID: MGYG000003064_6_135
Type: TF
Location: 165951 - 170126 (-)
Type: TF
Location: 165951 - 170126 (-)
Gene ID: MGYG000003064_6_136
Type: TC
Location: 170501 - 173674 (+)
Type: TC
Location: 170501 - 173674 (+)
Gene ID: MGYG000003064_6_137
Type: pfam
Location: 173691 - 175325 (+)
Type: pfam
Location: 173691 - 175325 (+)
Gene ID: MGYG000003064_6_138
Type: pfam
Location: 175342 - 176760 (+)
Type: pfam
Location: 175342 - 176760 (+)
Gene ID: MGYG000003064_6_139
Type: CAZyme
Location: 176785 - 179004 (+)
Type: CAZyme
Location: 176785 - 179004 (+)
Gene ID: MGYG000003064_6_140
Type:
Location: 178982 - 179113 (-)
Type:
Location: 178982 - 179113 (-)
Gene ID: MGYG000003064_6_141
Type: CAZyme
Location: 179184 - 180401 (+)
Type: CAZyme
Location: 179184 - 180401 (+)
Gene ID: MGYG000003064_6_142
Type: pfam
Location: 180563 - 181423 (+)
Type: pfam
Location: 180563 - 181423 (+)
Gene ID: MGYG000003064_6_143
Type: TF
Location: 181781 - 182638 (+)
Type: TF
Location: 181781 - 182638 (+)
Gene ID: MGYG000003064_6_144
Type: TC
Location: 182869 - 185949 (+)
Type: TC
Location: 182869 - 185949 (+)
Gene ID: MGYG000003064_6_145
Type: pfam
Location: 185969 - 187918 (+)
Type: pfam
Location: 185969 - 187918 (+)
Gene ID: MGYG000003064_6_146
Type: CAZyme
Location: 188013 - 189728 (+)
Type: CAZyme
Location: 188013 - 189728 (+)
Gene ID: MGYG000003064_6_147
Type: TC
Location: 189889 - 191373 (+)
Type: TC
Location: 189889 - 191373 (+)
Gene ID: MGYG000003064_6_148
Type: CAZyme
Location: 191393 - 192532 (+)
Type: CAZyme
Location: 191393 - 192532 (+)
Gene ID: MGYG000003064_6_149
Type: CAZyme
Location: 192549 - 195092 (+)
Type: CAZyme
Location: 192549 - 195092 (+)
Gene ID: MGYG000003064_6_150
Type: CAZyme
Location: 195210 - 196184 (+)
Type: CAZyme
Location: 195210 - 196184 (+)
Gene ID: MGYG000003064_6_151
Type: CAZyme
Location: 196256 - 197239 (+)
Type: CAZyme
Location: 196256 - 197239 (+)
Gene ID: MGYG000003064_6_152
Type: CAZyme
Location: 197272 - 199332 (+)
Type: CAZyme
Location: 197272 - 199332 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides_I
Species
Bacteroides_I graminisolvens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.