Cluster: MGYG000003064_CGC29
🧬 Cluster Details
- Gene Count: 17
- CAZyme Count: 8
- Substrate:
- Genome ID: MGYG000003064
- CGC Family ID: CGCFAM_02953
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003064_4 | MGYG000003064_4_92 | 117742 | 120597 | - | 1.B.14.6.1 |
| pfam | MGYG000003064_4 | MGYG000003064_4_93 | 120636 | 122576 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000003064_4 | MGYG000003064_4_94 | 122624 | 125815 | - | 1.B.14.6.1 |
| pfam | MGYG000003064_4 | MGYG000003064_4_95 | 126223 | 128523 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000003064_4 | MGYG000003064_4_96 | 128544 | 131738 | - | 1.B.14.6.1 |
| CAZyme | MGYG000003064_4 | MGYG000003064_4_97 | 132714 | 133844 | + | GH105 |
| CAZyme | MGYG000003064_4 | MGYG000003064_4_98 | 133916 | 136009 | - | GH42 |
| CAZyme | MGYG000003064_4 | MGYG000003064_4_99 | 136031 | 137014 | - | GH43_18 |
| CAZyme | MGYG000003064_4 | MGYG000003064_4_100 | 137219 | 140104 | + | GH2 |
| CAZyme | MGYG000003064_4 | MGYG000003064_4_101 | 140119 | 141393 | + | CE12 |
| CAZyme | MGYG000003064_4 | MGYG000003064_4_102 | 141422 | 142906 | + | GH28 |
| pfam | MGYG000003064_4 | MGYG000003064_4_103 | 142899 | 143630 | + | DUF4450 |
| NULL(UNKNOWN) | MGYG000003064_4 | MGYG000003064_4_104 | 143639 | 144469 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003064_4 | MGYG000003064_4_105 | 144466 | 145854 | + | GH28 |
| pfam | MGYG000003064_4 | MGYG000003064_4_106 | 145950 | 147989 | + | tRNA-synt_1 | tRNA_bind | Anticodon_1 | tRNA-synt_1g | Anticodon_3 |
| TC | MGYG000003064_4 | MGYG000003064_4_107 | 148016 | 149461 | + | 2.A.66.2.6 |
| CAZyme | MGYG000003064_4 | MGYG000003064_4_108 | 149496 | 150461 | + | GT2 |
Gene ID: MGYG000003064_4_92
Type: TC
Location: 117742 - 120597 (-)
Type: TC
Location: 117742 - 120597 (-)
Gene ID: MGYG000003064_4_93
Type: pfam
Location: 120636 - 122576 (-)
Type: pfam
Location: 120636 - 122576 (-)
Gene ID: MGYG000003064_4_94
Type: TC
Location: 122624 - 125815 (-)
Type: TC
Location: 122624 - 125815 (-)
Gene ID: MGYG000003064_4_95
Type: pfam
Location: 126223 - 128523 (-)
Type: pfam
Location: 126223 - 128523 (-)
Gene ID: MGYG000003064_4_96
Type: TC
Location: 128544 - 131738 (-)
Type: TC
Location: 128544 - 131738 (-)
Gene ID: MGYG000003064_4_97
Type: CAZyme
Location: 132714 - 133844 (+)
Type: CAZyme
Location: 132714 - 133844 (+)
Gene ID: MGYG000003064_4_98
Type: CAZyme
Location: 133916 - 136009 (-)
Type: CAZyme
Location: 133916 - 136009 (-)
Gene ID: MGYG000003064_4_99
Type: CAZyme
Location: 136031 - 137014 (-)
Type: CAZyme
Location: 136031 - 137014 (-)
Gene ID: MGYG000003064_4_100
Type: CAZyme
Location: 137219 - 140104 (+)
Type: CAZyme
Location: 137219 - 140104 (+)
Gene ID: MGYG000003064_4_101
Type: CAZyme
Location: 140119 - 141393 (+)
Type: CAZyme
Location: 140119 - 141393 (+)
Gene ID: MGYG000003064_4_102
Type: CAZyme
Location: 141422 - 142906 (+)
Type: CAZyme
Location: 141422 - 142906 (+)
Gene ID: MGYG000003064_4_103
Type: pfam
Location: 142899 - 143630 (+)
Type: pfam
Location: 142899 - 143630 (+)
Gene ID: MGYG000003064_4_104
Type:
Location: 143639 - 144469 (+)
Type:
Location: 143639 - 144469 (+)
Gene ID: MGYG000003064_4_105
Type: CAZyme
Location: 144466 - 145854 (+)
Type: CAZyme
Location: 144466 - 145854 (+)
Gene ID: MGYG000003064_4_106
Type: pfam
Location: 145950 - 147989 (+)
Type: pfam
Location: 145950 - 147989 (+)
Gene ID: MGYG000003064_4_107
Type: TC
Location: 148016 - 149461 (+)
Type: TC
Location: 148016 - 149461 (+)
Gene ID: MGYG000003064_4_108
Type: CAZyme
Location: 149496 - 150461 (+)
Type: CAZyme
Location: 149496 - 150461 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides_I
Species
Bacteroides_I graminisolvens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.