Cluster: MGYG000003064_CGC24
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 5
- Substrate: pectin
- Genome ID: MGYG000003064
- CGC Family ID: CGCFAM_00298
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003064_3 | MGYG000003064_3_203 | 254348 | 257182 | - | GH2 |
| TF | MGYG000003064_3 | MGYG000003064_3_204 | 257303 | 258211 | - | HTH_AraC |
| NULL(UNKNOWN) | MGYG000003064_3 | MGYG000003064_3_205 | 258320 | 258442 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003064_3 | MGYG000003064_3_206 | 258399 | 259760 | - | GH105 |
| pfam | MGYG000003064_3 | MGYG000003064_3_207 | 259807 | 260616 | - | Aldolase_II |
| TC | MGYG000003064_3 | MGYG000003064_3_208 | 260633 | 261664 | - | 2.A.7.6.1 |
| pfam | MGYG000003064_3 | MGYG000003064_3_209 | 261699 | 262952 | - | RhaA |
| pfam | MGYG000003064_3 | MGYG000003064_3_210 | 262980 | 264446 | - | FGGY_N | FGGY_C |
| CAZyme | MGYG000003064_3 | MGYG000003064_3_211 | 264697 | 266223 | - | GH28 |
| CAZyme | MGYG000003064_3 | MGYG000003064_3_212 | 266262 | 269012 | - | GH106 |
| CAZyme | MGYG000003064_3 | MGYG000003064_3_213 | 269041 | 270291 | - | GH105 |
Gene ID: MGYG000003064_3_203
Type: CAZyme
Location: 254348 - 257182 (-)
Type: CAZyme
Location: 254348 - 257182 (-)
Gene ID: MGYG000003064_3_204
Type: TF
Location: 257303 - 258211 (-)
Type: TF
Location: 257303 - 258211 (-)
Gene ID: MGYG000003064_3_205
Type:
Location: 258320 - 258442 (+)
Type:
Location: 258320 - 258442 (+)
Gene ID: MGYG000003064_3_206
Type: CAZyme
Location: 258399 - 259760 (-)
Type: CAZyme
Location: 258399 - 259760 (-)
Gene ID: MGYG000003064_3_207
Type: pfam
Location: 259807 - 260616 (-)
Type: pfam
Location: 259807 - 260616 (-)
Gene ID: MGYG000003064_3_208
Type: TC
Location: 260633 - 261664 (-)
Type: TC
Location: 260633 - 261664 (-)
Gene ID: MGYG000003064_3_209
Type: pfam
Location: 261699 - 262952 (-)
Type: pfam
Location: 261699 - 262952 (-)
Gene ID: MGYG000003064_3_210
Type: pfam
Location: 262980 - 264446 (-)
Type: pfam
Location: 262980 - 264446 (-)
Gene ID: MGYG000003064_3_211
Type: CAZyme
Location: 264697 - 266223 (-)
Type: CAZyme
Location: 264697 - 266223 (-)
Gene ID: MGYG000003064_3_212
Type: CAZyme
Location: 266262 - 269012 (-)
Type: CAZyme
Location: 266262 - 269012 (-)
Gene ID: MGYG000003064_3_213
Type: CAZyme
Location: 269041 - 270291 (-)
Type: CAZyme
Location: 269041 - 270291 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides_I
Species
Bacteroides_I graminisolvens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.