Cluster: MGYG000003064_CGC20
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate: pectin/galactan
- Genome ID: MGYG000003064
- CGC Family ID: CGCFAM_00031
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003064_3 | MGYG000003064_3_2 | 4194 | 6734 | + | GH147 |
| TC | MGYG000003064_3 | MGYG000003064_3_3 | 6768 | 9740 | + | 1.B.14.6.1 |
| pfam | MGYG000003064_3 | MGYG000003064_3_4 | 9761 | 11332 | + | SusD_RagB | SusD-like_3 |
| pfam | MGYG000003064_3 | MGYG000003064_3_5 | 11356 | 13050 | + | SusE | DUF5111 | DUF5114 |
| CAZyme | MGYG000003064_3 | MGYG000003064_3_6 | 13059 | 14087 | + | GH53 |
| TC | MGYG000003064_3 | MGYG000003064_3_7 | 14215 | 15813 | + | 2.A.81.1.2 |
| TC | MGYG000003064_3 | MGYG000003064_3_8 | 15817 | 16608 | - | 9.B.14.3.3 |
Gene ID: MGYG000003064_3_2
Type: CAZyme
Location: 4194 - 6734 (+)
Type: CAZyme
Location: 4194 - 6734 (+)
Gene ID: MGYG000003064_3_3
Type: TC
Location: 6768 - 9740 (+)
Type: TC
Location: 6768 - 9740 (+)
Gene ID: MGYG000003064_3_4
Type: pfam
Location: 9761 - 11332 (+)
Type: pfam
Location: 9761 - 11332 (+)
Gene ID: MGYG000003064_3_5
Type: pfam
Location: 11356 - 13050 (+)
Type: pfam
Location: 11356 - 13050 (+)
Gene ID: MGYG000003064_3_6
Type: CAZyme
Location: 13059 - 14087 (+)
Type: CAZyme
Location: 13059 - 14087 (+)
Gene ID: MGYG000003064_3_7
Type: TC
Location: 14215 - 15813 (+)
Type: TC
Location: 14215 - 15813 (+)
Gene ID: MGYG000003064_3_8
Type: TC
Location: 15817 - 16608 (-)
Type: TC
Location: 15817 - 16608 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides_I
Species
Bacteroides_I graminisolvens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.