Cluster: MGYG000003064_CGC11
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000003064
- CGC Family ID: CGCFAM_00676
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003064_1 | MGYG000003064_1_374 | 478548 | 479705 | + | CE19 |
| CAZyme | MGYG000003064_1 | MGYG000003064_1_375 | 479799 | 481526 | - | CE12 | CE8 |
| CAZyme | MGYG000003064_1 | MGYG000003064_1_376 | 481623 | 483245 | - | PL10_2 |
| pfam | MGYG000003064_1 | MGYG000003064_1_377 | 483269 | 483667 | + | Cupin_2 |
| CAZyme | MGYG000003064_1 | MGYG000003064_1_378 | 483654 | 488060 | - | GH2 | PL10_1 |
| pfam | MGYG000003064_1 | MGYG000003064_1_379 | 488178 | 490322 | - | SusD_RagB | SusD-like_3 |
| TC | MGYG000003064_1 | MGYG000003064_1_380 | 490343 | 493576 | - | 1.B.14.6.1 |
| pfam | MGYG000003064_1 | MGYG000003064_1_381 | 493805 | 495823 | - | SusD_RagB | SusD-like_2 | SusD-like_3 |
| TC | MGYG000003064_1 | MGYG000003064_1_382 | 495836 | 498907 | - | 1.B.14.6.1 |
| CAZyme | MGYG000003064_1 | MGYG000003064_1_383 | 499148 | 500110 | - | CE8 |
| CAZyme | MGYG000003064_1 | MGYG000003064_1_384 | 500110 | 501324 | - | GH105 |
| TC | MGYG000003064_1 | MGYG000003064_1_385 | 501593 | 503059 | + | 2.A.1.14.25 |
| pfam | MGYG000003064_1 | MGYG000003064_1_386 | 503736 | 507143 | - | AAA_11 | AAA_11 | AAA_12 | AAA_19 | AAA_30 |
| TC | MGYG000003064_1 | MGYG000003064_1_387 | 507136 | 507936 | - | 2.A.64.3.2 |
Gene ID: MGYG000003064_1_374
Type: CAZyme
Location: 478548 - 479705 (+)
Type: CAZyme
Location: 478548 - 479705 (+)
Gene ID: MGYG000003064_1_375
Type: CAZyme
Location: 479799 - 481526 (-)
Type: CAZyme
Location: 479799 - 481526 (-)
Gene ID: MGYG000003064_1_376
Type: CAZyme
Location: 481623 - 483245 (-)
Type: CAZyme
Location: 481623 - 483245 (-)
Gene ID: MGYG000003064_1_377
Type: pfam
Location: 483269 - 483667 (+)
Type: pfam
Location: 483269 - 483667 (+)
Gene ID: MGYG000003064_1_378
Type: CAZyme
Location: 483654 - 488060 (-)
Type: CAZyme
Location: 483654 - 488060 (-)
Gene ID: MGYG000003064_1_379
Type: pfam
Location: 488178 - 490322 (-)
Type: pfam
Location: 488178 - 490322 (-)
Gene ID: MGYG000003064_1_380
Type: TC
Location: 490343 - 493576 (-)
Type: TC
Location: 490343 - 493576 (-)
Gene ID: MGYG000003064_1_381
Type: pfam
Location: 493805 - 495823 (-)
Type: pfam
Location: 493805 - 495823 (-)
Gene ID: MGYG000003064_1_382
Type: TC
Location: 495836 - 498907 (-)
Type: TC
Location: 495836 - 498907 (-)
Gene ID: MGYG000003064_1_383
Type: CAZyme
Location: 499148 - 500110 (-)
Type: CAZyme
Location: 499148 - 500110 (-)
Gene ID: MGYG000003064_1_384
Type: CAZyme
Location: 500110 - 501324 (-)
Type: CAZyme
Location: 500110 - 501324 (-)
Gene ID: MGYG000003064_1_385
Type: TC
Location: 501593 - 503059 (+)
Type: TC
Location: 501593 - 503059 (+)
Gene ID: MGYG000003064_1_386
Type: pfam
Location: 503736 - 507143 (-)
Type: pfam
Location: 503736 - 507143 (-)
Gene ID: MGYG000003064_1_387
Type: TC
Location: 507136 - 507936 (-)
Type: TC
Location: 507136 - 507936 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Bacteroides_I
Species
Bacteroides_I graminisolvens
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.