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Cluster: MGYG000003062_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003062_1 MGYG000003062_1_1 173 1933 - 4.A.3.1.1
CAZyme MGYG000003062_1 MGYG000003062_1_2 2110 3552 - GH1
TF MGYG000003062_1 MGYG000003062_1_3 3894 4931 + LacI
CAZyme MGYG000003062_1 MGYG000003062_1_4 5198 6637 - GH1
TC MGYG000003062_1 MGYG000003062_1_5 6704 8476 - 4.A.3.1.1
TF MGYG000003062_1 MGYG000003062_1_6 8833 9837 + LacI
TC MGYG000003062_1 MGYG000003062_1_7 10052 10390 + 4.A.3.1.2
Gene ID: MGYG000003062_1_1
Type: TC
Location: 173 - 1933 (-)
Gene ID: MGYG000003062_1_2
Type: CAZyme
Location: 2110 - 3552 (-)
Gene ID: MGYG000003062_1_3
Type: TF
Location: 3894 - 4931 (+)
Gene ID: MGYG000003062_1_4
Type: CAZyme
Location: 5198 - 6637 (-)
Gene ID: MGYG000003062_1_5
Type: TC
Location: 6704 - 8476 (-)
Gene ID: MGYG000003062_1_6
Type: TF
Location: 8833 - 9837 (+)
Gene ID: MGYG000003062_1_7
Type: TC
Location: 10052 - 10390 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003062_1_3 vegetarian > omnivore 1.10212 0.03181

🧭 Explore Read Mapping of CGC

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