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Cluster: MGYG000003052_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003052_1 MGYG000003052_1_4 2657 4033 - GH13_20
TC MGYG000003052_1 MGYG000003052_1_5 4187 5383 - 2.A.1.2.18
TC MGYG000003052_1 MGYG000003052_1_6 5504 7864 - 9.A.8.1.6
peptidase MGYG000003052_1 MGYG000003052_1_7 8337 9236 - S09.UPW
TC MGYG000003052_1 MGYG000003052_1_8 9480 10043 + 4.A.1.2.6
pfam MGYG000003052_1 MGYG000003052_1_9 10225 11628 + tRNA-synt_2 | tRNA_anti-codon
NULL(UNKNOWN) MGYG000003052_1 MGYG000003052_1_10 11887 12675 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000003052_1 MGYG000003052_1_11 12836 13816 + 3.A.1.34.1
TC MGYG000003052_1 MGYG000003052_1_12 14020 14943 + 3.A.1.34.1
TC MGYG000003052_1 MGYG000003052_1_13 14936 15730 + 3.A.1.34.1
Gene ID: MGYG000003052_1_4
Type: CAZyme
Location: 2657 - 4033 (-)
Gene ID: MGYG000003052_1_5
Type: TC
Location: 4187 - 5383 (-)
Gene ID: MGYG000003052_1_6
Type: TC
Location: 5504 - 7864 (-)
Gene ID: MGYG000003052_1_7
Type: peptidase
Location: 8337 - 9236 (-)
Gene ID: MGYG000003052_1_8
Type: TC
Location: 9480 - 10043 (+)
Gene ID: MGYG000003052_1_9
Type: pfam
Location: 10225 - 11628 (+)
Gene ID: MGYG000003052_1_10
Type:
Location: 11887 - 12675 (+)
Gene ID: MGYG000003052_1_11
Type: TC
Location: 12836 - 13816 (+)
Gene ID: MGYG000003052_1_12
Type: TC
Location: 14020 - 14943 (+)
Gene ID: MGYG000003052_1_13
Type: TC
Location: 14936 - 15730 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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