Cluster: MGYG000003042_CGC41
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003042
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003042_32 | MGYG000003042_32_4 | 1391 | 1630 | + | 2.A.98.1.4 |
| pfam | MGYG000003042_32 | MGYG000003042_32_5 | 1688 | 2569 | - | SDH_alpha |
| STP | MGYG000003042_32 | MGYG000003042_32_6 | 2588 | 3244 | - | ACT |
| TC | MGYG000003042_32 | MGYG000003042_32_7 | 3397 | 4794 | + | 2.A.66.1.32 |
| NULL(UNKNOWN) | MGYG000003042_32 | MGYG000003042_32_8 | 4791 | 5291 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003042_32 | MGYG000003042_32_9 | 5308 | 7062 | + | GH2 |
Gene ID: MGYG000003042_32_4
Type: TC
Location: 1391 - 1630 (+)
Type: TC
Location: 1391 - 1630 (+)
Gene ID: MGYG000003042_32_5
Type: pfam
Location: 1688 - 2569 (-)
Type: pfam
Location: 1688 - 2569 (-)
Gene ID: MGYG000003042_32_6
Type: STP
Location: 2588 - 3244 (-)
Type: STP
Location: 2588 - 3244 (-)
Gene ID: MGYG000003042_32_7
Type: TC
Location: 3397 - 4794 (+)
Type: TC
Location: 3397 - 4794 (+)
Gene ID: MGYG000003042_32_8
Type:
Location: 4791 - 5291 (+)
Type:
Location: 4791 - 5291 (+)
Gene ID: MGYG000003042_32_9
Type: CAZyme
Location: 5308 - 7062 (+)
Type: CAZyme
Location: 5308 - 7062 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900545545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.