Cluster: MGYG000003042_CGC33
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003042
- CGC Family ID: CGCFAM_00555
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003042_18 | MGYG000003042_18_26 | 25770 | 26627 | + | GT2 |
| pfam | MGYG000003042_18 | MGYG000003042_18_27 | 26657 | 27613 | + | Zn_ribbon_3 |
| NULL(UNKNOWN) | MGYG000003042_18 | MGYG000003042_18_28 | 27752 | 28045 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003042_18 | MGYG000003042_18_29 | 28042 | 28635 | + | 2.A.124.1.3 |
| peptidase | MGYG000003042_18 | MGYG000003042_18_30 | 28975 | 30762 | - | M24.UPB |
| TC | MGYG000003042_18 | MGYG000003042_18_31 | 30967 | 32130 | + | 9.B.10.1.1 |
Gene ID: MGYG000003042_18_26
Type: CAZyme
Location: 25770 - 26627 (+)
Type: CAZyme
Location: 25770 - 26627 (+)
Gene ID: MGYG000003042_18_27
Type: pfam
Location: 26657 - 27613 (+)
Type: pfam
Location: 26657 - 27613 (+)
Gene ID: MGYG000003042_18_28
Type:
Location: 27752 - 28045 (+)
Type:
Location: 27752 - 28045 (+)
Gene ID: MGYG000003042_18_29
Type: TC
Location: 28042 - 28635 (+)
Type: TC
Location: 28042 - 28635 (+)
Gene ID: MGYG000003042_18_30
Type: peptidase
Location: 28975 - 30762 (-)
Type: peptidase
Location: 28975 - 30762 (-)
Gene ID: MGYG000003042_18_31
Type: TC
Location: 30967 - 32130 (+)
Type: TC
Location: 30967 - 32130 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900545545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.