Cluster: MGYG000003042_CGC31
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003042
- CGC Family ID: CGCFAM_04020
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003042_17 | MGYG000003042_17_7 | 9048 | 11285 | - | GH3 |
| pfam | MGYG000003042_17 | MGYG000003042_17_8 | 11746 | 12570 | - | adh_short | KR | adh_short_C2 |
| pfam | MGYG000003042_17 | MGYG000003042_17_9 | 12607 | 13458 | - | AP_endonuc_2 |
| CAZyme | MGYG000003042_17 | MGYG000003042_17_10 | 13462 | 15276 | - | CBM32 | GH43_28 |
| CAZyme | MGYG000003042_17 | MGYG000003042_17_11 | 15282 | 17465 | - | GH2 |
| TC | MGYG000003042_17 | MGYG000003042_17_12 | 17536 | 19023 | - | 2.A.2.3.5 |
| CAZyme | MGYG000003042_17 | MGYG000003042_17_13 | 19263 | 20564 | + | GH1 |
Gene ID: MGYG000003042_17_7
Type: CAZyme
Location: 9048 - 11285 (-)
Type: CAZyme
Location: 9048 - 11285 (-)
Gene ID: MGYG000003042_17_8
Type: pfam
Location: 11746 - 12570 (-)
Type: pfam
Location: 11746 - 12570 (-)
Gene ID: MGYG000003042_17_9
Type: pfam
Location: 12607 - 13458 (-)
Type: pfam
Location: 12607 - 13458 (-)
Gene ID: MGYG000003042_17_10
Type: CAZyme
Location: 13462 - 15276 (-)
Type: CAZyme
Location: 13462 - 15276 (-)
Gene ID: MGYG000003042_17_11
Type: CAZyme
Location: 15282 - 17465 (-)
Type: CAZyme
Location: 15282 - 17465 (-)
Gene ID: MGYG000003042_17_12
Type: TC
Location: 17536 - 19023 (-)
Type: TC
Location: 17536 - 19023 (-)
Gene ID: MGYG000003042_17_13
Type: CAZyme
Location: 19263 - 20564 (+)
Type: CAZyme
Location: 19263 - 20564 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900545545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.