Cluster: MGYG000003042_CGC30
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003042
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003042_13 | MGYG000003042_13_22 | 26517 | 27359 | - | GT6 |
| TC | MGYG000003042_13 | MGYG000003042_13_23 | 27356 | 28642 | - | 3.A.1.103.5 |
| TC | MGYG000003042_13 | MGYG000003042_13_24 | 28656 | 29516 | - | 3.A.1.103.5 |
| CAZyme | MGYG000003042_13 | MGYG000003042_13_25 | 29544 | 30512 | - | GT2 |
| CAZyme | MGYG000003042_13 | MGYG000003042_13_26 | 30535 | 31530 | - | GT2 |
| pfam | MGYG000003042_13 | MGYG000003042_13_27 | 31541 | 32650 | - | ATPgrasp_TupA |
| CAZyme | MGYG000003042_13 | MGYG000003042_13_28 | 32669 | 33727 | - | GT2 |
Gene ID: MGYG000003042_13_22
Type: CAZyme
Location: 26517 - 27359 (-)
Type: CAZyme
Location: 26517 - 27359 (-)
Gene ID: MGYG000003042_13_23
Type: TC
Location: 27356 - 28642 (-)
Type: TC
Location: 27356 - 28642 (-)
Gene ID: MGYG000003042_13_24
Type: TC
Location: 28656 - 29516 (-)
Type: TC
Location: 28656 - 29516 (-)
Gene ID: MGYG000003042_13_25
Type: CAZyme
Location: 29544 - 30512 (-)
Type: CAZyme
Location: 29544 - 30512 (-)
Gene ID: MGYG000003042_13_26
Type: CAZyme
Location: 30535 - 31530 (-)
Type: CAZyme
Location: 30535 - 31530 (-)
Gene ID: MGYG000003042_13_27
Type: pfam
Location: 31541 - 32650 (-)
Type: pfam
Location: 31541 - 32650 (-)
Gene ID: MGYG000003042_13_28
Type: CAZyme
Location: 32669 - 33727 (-)
Type: CAZyme
Location: 32669 - 33727 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900545545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.