Cluster: MGYG000003042_CGC3
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000003042
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003042_1 | MGYG000003042_1_297 | 340901 | 341848 | + | 3.A.1.34.1 |
| TC | MGYG000003042_1 | MGYG000003042_1_298 | 341841 | 342635 | + | 3.A.1.34.1 |
| pfam | MGYG000003042_1 | MGYG000003042_1_299 | 342819 | 344495 | + | Lipase_GDSL_2 | Flg_new_2 |
| pfam | MGYG000003042_1 | MGYG000003042_1_300 | 344523 | 345272 | + | Hydrolase | Hydrolase_like | HAD_2 |
| TC | MGYG000003042_1 | MGYG000003042_1_301 | 345359 | 347248 | + | 3.A.1.121.4 |
| CAZyme | MGYG000003042_1 | MGYG000003042_1_302 | 347377 | 348147 | + | GT111 |
| CAZyme | MGYG000003042_1 | MGYG000003042_1_303 | 348152 | 349033 | + | GT2 |
| pfam | MGYG000003042_1 | MGYG000003042_1_304 | 349030 | 350781 | + | Hydrolase | Hydrolase_like |
| CAZyme | MGYG000003042_1 | MGYG000003042_1_305 | 350803 | 351816 | + | GT2 |
Gene ID: MGYG000003042_1_297
Type: TC
Location: 340901 - 341848 (+)
Type: TC
Location: 340901 - 341848 (+)
Gene ID: MGYG000003042_1_298
Type: TC
Location: 341841 - 342635 (+)
Type: TC
Location: 341841 - 342635 (+)
Gene ID: MGYG000003042_1_299
Type: pfam
Location: 342819 - 344495 (+)
Type: pfam
Location: 342819 - 344495 (+)
Gene ID: MGYG000003042_1_300
Type: pfam
Location: 344523 - 345272 (+)
Type: pfam
Location: 344523 - 345272 (+)
Gene ID: MGYG000003042_1_301
Type: TC
Location: 345359 - 347248 (+)
Type: TC
Location: 345359 - 347248 (+)
Gene ID: MGYG000003042_1_302
Type: CAZyme
Location: 347377 - 348147 (+)
Type: CAZyme
Location: 347377 - 348147 (+)
Gene ID: MGYG000003042_1_303
Type: CAZyme
Location: 348152 - 349033 (+)
Type: CAZyme
Location: 348152 - 349033 (+)
Gene ID: MGYG000003042_1_304
Type: pfam
Location: 349030 - 350781 (+)
Type: pfam
Location: 349030 - 350781 (+)
Gene ID: MGYG000003042_1_305
Type: CAZyme
Location: 350803 - 351816 (+)
Type: CAZyme
Location: 350803 - 351816 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900545545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.