Cluster: MGYG000003042_CGC23
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 7
- Substrate:
- Genome ID: MGYG000003042
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003042_8 | MGYG000003042_8_18 | 17354 | 18148 | - | GT2 |
| NULL(UNKNOWN) | MGYG000003042_8 | MGYG000003042_8_19 | 18223 | 19941 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003042_8 | MGYG000003042_8_20 | 19938 | 20789 | - | GT6 |
| TC | MGYG000003042_8 | MGYG000003042_8_21 | 20789 | 22321 | - | 2.A.66.1.40 |
| CAZyme | MGYG000003042_8 | MGYG000003042_8_22 | 22328 | 23326 | - | GT2 |
| CAZyme | MGYG000003042_8 | MGYG000003042_8_23 | 23345 | 24262 | - | GT11 |
| CAZyme | MGYG000003042_8 | MGYG000003042_8_24 | 24259 | 25365 | - | GT4 |
| NULL(UNKNOWN) | MGYG000003042_8 | MGYG000003042_8_25 | 26040 | 26945 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003042_8 | MGYG000003042_8_26 | 26932 | 28053 | - | GT4 |
| pfam | MGYG000003042_8 | MGYG000003042_8_27 | 28050 | 29057 | - | GINT1_N |
| CAZyme | MGYG000003042_8 | MGYG000003042_8_28 | 29054 | 30217 | - | GT4 |
Gene ID: MGYG000003042_8_18
Type: CAZyme
Location: 17354 - 18148 (-)
Type: CAZyme
Location: 17354 - 18148 (-)
Gene ID: MGYG000003042_8_19
Type:
Location: 18223 - 19941 (-)
Type:
Location: 18223 - 19941 (-)
Gene ID: MGYG000003042_8_20
Type: CAZyme
Location: 19938 - 20789 (-)
Type: CAZyme
Location: 19938 - 20789 (-)
Gene ID: MGYG000003042_8_21
Type: TC
Location: 20789 - 22321 (-)
Type: TC
Location: 20789 - 22321 (-)
Gene ID: MGYG000003042_8_22
Type: CAZyme
Location: 22328 - 23326 (-)
Type: CAZyme
Location: 22328 - 23326 (-)
Gene ID: MGYG000003042_8_23
Type: CAZyme
Location: 23345 - 24262 (-)
Type: CAZyme
Location: 23345 - 24262 (-)
Gene ID: MGYG000003042_8_24
Type: CAZyme
Location: 24259 - 25365 (-)
Type: CAZyme
Location: 24259 - 25365 (-)
Gene ID: MGYG000003042_8_25
Type:
Location: 26040 - 26945 (-)
Type:
Location: 26040 - 26945 (-)
Gene ID: MGYG000003042_8_26
Type: CAZyme
Location: 26932 - 28053 (-)
Type: CAZyme
Location: 26932 - 28053 (-)
Gene ID: MGYG000003042_8_27
Type: pfam
Location: 28050 - 29057 (-)
Type: pfam
Location: 28050 - 29057 (-)
Gene ID: MGYG000003042_8_28
Type: CAZyme
Location: 29054 - 30217 (-)
Type: CAZyme
Location: 29054 - 30217 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900545545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.