Cluster: MGYG000003042_CGC2
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003042
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003042_1 | MGYG000003042_1_153 | 164354 | 165820 | + | 2.A.38.1.1 |
| CAZyme | MGYG000003042_1 | MGYG000003042_1_154 | 165953 | 166732 | + | CE4 |
| NULL(UNKNOWN) | MGYG000003042_1 | MGYG000003042_1_155 | 166765 | 167304 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003042_1 | MGYG000003042_1_156 | 167355 | 168677 | + | GH13_20 |
| STP | MGYG000003042_1 | MGYG000003042_1_157 | 168744 | 170216 | - | Pyr_redox_2 |
| STP | MGYG000003042_1 | MGYG000003042_1_158 | 170231 | 174781 | - | GATase_2 |
| TC | MGYG000003042_1 | MGYG000003042_1_159 | 175019 | 175471 | - | 1.A.22.1.3 |
| TC | MGYG000003042_1 | MGYG000003042_1_160 | 175494 | 176318 | - | 3.A.1.132.3 |
| pfam | MGYG000003042_1 | MGYG000003042_1_161 | 176405 | 177214 | - | PNP_UDP_1 |
| pfam | MGYG000003042_1 | MGYG000003042_1_162 | 177329 | 178639 | + | MatE | Polysacc_synt |
| TC | MGYG000003042_1 | MGYG000003042_1_163 | 178679 | 180454 | - | 3.A.1.106.2 |
Gene ID: MGYG000003042_1_153
Type: TC
Location: 164354 - 165820 (+)
Type: TC
Location: 164354 - 165820 (+)
Gene ID: MGYG000003042_1_154
Type: CAZyme
Location: 165953 - 166732 (+)
Type: CAZyme
Location: 165953 - 166732 (+)
Gene ID: MGYG000003042_1_155
Type:
Location: 166765 - 167304 (+)
Type:
Location: 166765 - 167304 (+)
Gene ID: MGYG000003042_1_156
Type: CAZyme
Location: 167355 - 168677 (+)
Type: CAZyme
Location: 167355 - 168677 (+)
Gene ID: MGYG000003042_1_157
Type: STP
Location: 168744 - 170216 (-)
Type: STP
Location: 168744 - 170216 (-)
Gene ID: MGYG000003042_1_158
Type: STP
Location: 170231 - 174781 (-)
Type: STP
Location: 170231 - 174781 (-)
Gene ID: MGYG000003042_1_159
Type: TC
Location: 175019 - 175471 (-)
Type: TC
Location: 175019 - 175471 (-)
Gene ID: MGYG000003042_1_160
Type: TC
Location: 175494 - 176318 (-)
Type: TC
Location: 175494 - 176318 (-)
Gene ID: MGYG000003042_1_161
Type: pfam
Location: 176405 - 177214 (-)
Type: pfam
Location: 176405 - 177214 (-)
Gene ID: MGYG000003042_1_162
Type: pfam
Location: 177329 - 178639 (+)
Type: pfam
Location: 177329 - 178639 (+)
Gene ID: MGYG000003042_1_163
Type: TC
Location: 178679 - 180454 (-)
Type: TC
Location: 178679 - 180454 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900545545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.