Cluster: MGYG000003042_CGC18
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000003042
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003042_6 | MGYG000003042_6_8 | 7722 | 9335 | + | 2.A.36.6.5 |
| TC | MGYG000003042_6 | MGYG000003042_6_9 | 9479 | 12133 | + | 3.A.3.4.1 |
| TF | MGYG000003042_6 | MGYG000003042_6_10 | 12151 | 12654 | + | Trans_reg_C |
| TC | MGYG000003042_6 | MGYG000003042_6_11 | 12944 | 15718 | + | 3.A.3.4.1 |
| NULL(UNKNOWN) | MGYG000003042_6 | MGYG000003042_6_12 | 15734 | 15931 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003042_6 | MGYG000003042_6_13 | 16779 | 17894 | - | GT28 |
| pfam | MGYG000003042_6 | MGYG000003042_6_14 | 17882 | 18487 | - | G3P_acyltransf |
| TC | MGYG000003042_6 | MGYG000003042_6_15 | 18875 | 22543 | - | 3.A.1.122.2 |
| CAZyme | MGYG000003042_6 | MGYG000003042_6_16 | 22964 | 23809 | + | GT8 |
| TF | MGYG000003042_6 | MGYG000003042_6_17 | 23916 | 24341 | + | Rrf2 |
| pfam | MGYG000003042_6 | MGYG000003042_6_18 | 24555 | 25316 | - | DnaJ |
| TC | MGYG000003042_6 | MGYG000003042_6_19 | 25313 | 26164 | - | 1.E.12.1.3 |
Gene ID: MGYG000003042_6_8
Type: TC
Location: 7722 - 9335 (+)
Type: TC
Location: 7722 - 9335 (+)
Gene ID: MGYG000003042_6_9
Type: TC
Location: 9479 - 12133 (+)
Type: TC
Location: 9479 - 12133 (+)
Gene ID: MGYG000003042_6_10
Type: TF
Location: 12151 - 12654 (+)
Type: TF
Location: 12151 - 12654 (+)
Gene ID: MGYG000003042_6_11
Type: TC
Location: 12944 - 15718 (+)
Type: TC
Location: 12944 - 15718 (+)
Gene ID: MGYG000003042_6_12
Type:
Location: 15734 - 15931 (+)
Type:
Location: 15734 - 15931 (+)
Gene ID: MGYG000003042_6_13
Type: CAZyme
Location: 16779 - 17894 (-)
Type: CAZyme
Location: 16779 - 17894 (-)
Gene ID: MGYG000003042_6_14
Type: pfam
Location: 17882 - 18487 (-)
Type: pfam
Location: 17882 - 18487 (-)
Gene ID: MGYG000003042_6_15
Type: TC
Location: 18875 - 22543 (-)
Type: TC
Location: 18875 - 22543 (-)
Gene ID: MGYG000003042_6_16
Type: CAZyme
Location: 22964 - 23809 (+)
Type: CAZyme
Location: 22964 - 23809 (+)
Gene ID: MGYG000003042_6_17
Type: TF
Location: 23916 - 24341 (+)
Type: TF
Location: 23916 - 24341 (+)
Gene ID: MGYG000003042_6_18
Type: pfam
Location: 24555 - 25316 (-)
Type: pfam
Location: 24555 - 25316 (-)
Gene ID: MGYG000003042_6_19
Type: TC
Location: 25313 - 26164 (-)
Type: TC
Location: 25313 - 26164 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Ruminococcaceae
Genus
Gemmiger
Species
Gemmiger sp900545545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.