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Cluster: MGYG000003035_CGC55

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003035_40 MGYG000003035_40_15 20062 21486 + GH53
NULL(UNKNOWN) MGYG000003035_40 MGYG000003035_40_16 21495 22847 + NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000003035_40 MGYG000003035_40_17 22866 25949 + 1.B.14.6.1
pfam MGYG000003035_40 MGYG000003035_40_18 26001 27467 + SusD_RagB | SusD-like_3
CAZyme MGYG000003035_40 MGYG000003035_40_19 27467 29824 + GH35
CAZyme MGYG000003035_40 MGYG000003035_40_20 29821 32055 + GH147
NULL(UNKNOWN) MGYG000003035_40 MGYG000003035_40_21 32124 33074 - NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000003035_40 MGYG000003035_40_22 33789 34403 + UPF0227 | Abhydrolase_6
CAZyme MGYG000003035_40 MGYG000003035_40_23 34428 35756 + GH5_7
Gene ID: MGYG000003035_40_15
Type: CAZyme
Location: 20062 - 21486 (+)
Gene ID: MGYG000003035_40_16
Type:
Location: 21495 - 22847 (+)
Gene ID: MGYG000003035_40_17
Type: TC
Location: 22866 - 25949 (+)
Gene ID: MGYG000003035_40_18
Type: pfam
Location: 26001 - 27467 (+)
Gene ID: MGYG000003035_40_19
Type: CAZyme
Location: 27467 - 29824 (+)
Gene ID: MGYG000003035_40_20
Type: CAZyme
Location: 29821 - 32055 (+)
Gene ID: MGYG000003035_40_21
Type:
Location: 32124 - 33074 (-)
Gene ID: MGYG000003035_40_22
Type: pfam
Location: 33789 - 34403 (+)
Gene ID: MGYG000003035_40_23
Type: CAZyme
Location: 34428 - 35756 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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