Cluster: MGYG000003035_CGC18
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 6
- Substrate:
- Genome ID: MGYG000003035
- CGC Family ID: CGCFAM_00068
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003035_11 | MGYG000003035_11_12 | 13545 | 14975 | - | CE20 |
| STP | MGYG000003035_11 | MGYG000003035_11_13 | 15129 | 16157 | + | FecR |
| CAZyme | MGYG000003035_11 | MGYG000003035_11_14 | 16211 | 17953 | + | GH5_39 |
| TC | MGYG000003035_11 | MGYG000003035_11_15 | 17964 | 21431 | + | 1.B.14.6.1 |
| TC | MGYG000003035_11 | MGYG000003035_11_16 | 21477 | 22973 | + | 8.A.46.1.4 |
| NULL(UNKNOWN) | MGYG000003035_11 | MGYG000003035_11_17 | 23051 | 25189 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000003035_11 | MGYG000003035_11_18 | 25186 | 27405 | + | GH3 |
| TC | MGYG000003035_11 | MGYG000003035_11_19 | 27794 | 31102 | + | 1.B.14.6.1 |
| pfam | MGYG000003035_11 | MGYG000003035_11_20 | 31122 | 32849 | + | SusD_RagB | SusD-like_3 |
| pfam | MGYG000003035_11 | MGYG000003035_11_21 | 32925 | 34439 | + | SusF_SusE | SusF_SusE |
| CAZyme | MGYG000003035_11 | MGYG000003035_11_22 | 34540 | 35949 | + | GH27 |
| pfam | MGYG000003035_11 | MGYG000003035_11_23 | 35958 | 36893 | + | SusF_SusE |
| CAZyme | MGYG000003035_11 | MGYG000003035_11_24 | 36900 | 38879 | + | CE20 | CE20 |
| CAZyme | MGYG000003035_11 | MGYG000003035_11_25 | 38897 | 40948 | + | GH97 |
Gene ID: MGYG000003035_11_12
Type: CAZyme
Location: 13545 - 14975 (-)
Type: CAZyme
Location: 13545 - 14975 (-)
Gene ID: MGYG000003035_11_13
Type: STP
Location: 15129 - 16157 (+)
Type: STP
Location: 15129 - 16157 (+)
Gene ID: MGYG000003035_11_14
Type: CAZyme
Location: 16211 - 17953 (+)
Type: CAZyme
Location: 16211 - 17953 (+)
Gene ID: MGYG000003035_11_15
Type: TC
Location: 17964 - 21431 (+)
Type: TC
Location: 17964 - 21431 (+)
Gene ID: MGYG000003035_11_16
Type: TC
Location: 21477 - 22973 (+)
Type: TC
Location: 21477 - 22973 (+)
Gene ID: MGYG000003035_11_17
Type:
Location: 23051 - 25189 (+)
Type:
Location: 23051 - 25189 (+)
Gene ID: MGYG000003035_11_18
Type: CAZyme
Location: 25186 - 27405 (+)
Type: CAZyme
Location: 25186 - 27405 (+)
Gene ID: MGYG000003035_11_19
Type: TC
Location: 27794 - 31102 (+)
Type: TC
Location: 27794 - 31102 (+)
Gene ID: MGYG000003035_11_20
Type: pfam
Location: 31122 - 32849 (+)
Type: pfam
Location: 31122 - 32849 (+)
Gene ID: MGYG000003035_11_21
Type: pfam
Location: 32925 - 34439 (+)
Type: pfam
Location: 32925 - 34439 (+)
Gene ID: MGYG000003035_11_22
Type: CAZyme
Location: 34540 - 35949 (+)
Type: CAZyme
Location: 34540 - 35949 (+)
Gene ID: MGYG000003035_11_23
Type: pfam
Location: 35958 - 36893 (+)
Type: pfam
Location: 35958 - 36893 (+)
Gene ID: MGYG000003035_11_24
Type: CAZyme
Location: 36900 - 38879 (+)
Type: CAZyme
Location: 36900 - 38879 (+)
Gene ID: MGYG000003035_11_25
Type: CAZyme
Location: 38897 - 40948 (+)
Type: CAZyme
Location: 38897 - 40948 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Muribaculaceae
Genus
Lepagella
Species
Lepagella sp900542185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.