Cluster: MGYG000003033_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003033
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003033_17 | MGYG000003033_17_10 | 8981 | 10381 | + | GH1 |
| TC | MGYG000003033_17 | MGYG000003033_17_11 | 10502 | 11845 | + | 4.A.3.2.9 |
| TC | MGYG000003033_17 | MGYG000003033_17_12 | 12006 | 12308 | + | 4.A.3.2.9 |
| TC | MGYG000003033_17 | MGYG000003033_17_13 | 12318 | 12650 | + | 4.A.3.2.3 |
| pfam | MGYG000003033_17 | MGYG000003033_17_14 | 12892 | 13845 | + | ROK |
| pfam | MGYG000003033_17 | MGYG000003033_17_15 | 14012 | 14935 | + | DHH | DHHA2 |
| TC | MGYG000003033_17 | MGYG000003033_17_16 | 15203 | 16561 | + | 2.A.33.1.1 |
Gene ID: MGYG000003033_17_10
Type: CAZyme
Location: 8981 - 10381 (+)
Type: CAZyme
Location: 8981 - 10381 (+)
Gene ID: MGYG000003033_17_11
Type: TC
Location: 10502 - 11845 (+)
Type: TC
Location: 10502 - 11845 (+)
Gene ID: MGYG000003033_17_12
Type: TC
Location: 12006 - 12308 (+)
Type: TC
Location: 12006 - 12308 (+)
Gene ID: MGYG000003033_17_13
Type: TC
Location: 12318 - 12650 (+)
Type: TC
Location: 12318 - 12650 (+)
Gene ID: MGYG000003033_17_14
Type: pfam
Location: 12892 - 13845 (+)
Type: pfam
Location: 12892 - 13845 (+)
Gene ID: MGYG000003033_17_15
Type: pfam
Location: 14012 - 14935 (+)
Type: pfam
Location: 14012 - 14935 (+)
Gene ID: MGYG000003033_17_16
Type: TC
Location: 15203 - 16561 (+)
Type: TC
Location: 15203 - 16561 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900549185
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.