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Cluster: MGYG000003032_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003032_4 MGYG000003032_4_34 37700 38869 - CE9
STP MGYG000003032_4 MGYG000003032_4_35 38987 40153 - SIS | SIS
TF MGYG000003032_4 MGYG000003032_4_36 40268 40999 - GntR
TC MGYG000003032_4 MGYG000003032_4_37 41185 42267 - 4.A.6.1.4
TC MGYG000003032_4 MGYG000003032_4_38 42257 43057 - 4.A.6.1.4
TC MGYG000003032_4 MGYG000003032_4_39 43148 43630 - 4.A.6.1.4
pfam MGYG000003032_4 MGYG000003032_4_40 43667 43948 - YajC
TC MGYG000003032_4 MGYG000003032_4_41 43948 44391 - 4.A.6.1.16
Gene ID: MGYG000003032_4_34
Type: CAZyme
Location: 37700 - 38869 (-)
Gene ID: MGYG000003032_4_35
Type: STP
Location: 38987 - 40153 (-)
Gene ID: MGYG000003032_4_36
Type: TF
Location: 40268 - 40999 (-)
Gene ID: MGYG000003032_4_37
Type: TC
Location: 41185 - 42267 (-)
Gene ID: MGYG000003032_4_38
Type: TC
Location: 42257 - 43057 (-)
Gene ID: MGYG000003032_4_39
Type: TC
Location: 43148 - 43630 (-)
Gene ID: MGYG000003032_4_40
Type: pfam
Location: 43667 - 43948 (-)
Gene ID: MGYG000003032_4_41
Type: TC
Location: 43948 - 44391 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003032_4_40 vegan > omnivore 1.03243 0.00863

🧭 Explore Read Mapping of CGC

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