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Cluster: MGYG000003025_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003025_8 MGYG000003025_8_6 7341 8171 - 3.A.1.132.3
pfam MGYG000003025_8 MGYG000003025_8_7 8430 11309 + UvrA_DNA-bind | UvrA_inter
pfam MGYG000003025_8 MGYG000003025_8_8 11443 11943 + tRNA_edit
TC MGYG000003025_8 MGYG000003025_8_9 11947 14250 + 2.A.66.4.4
pfam MGYG000003025_8 MGYG000003025_8_10 14257 16197 + GIY-YIG | UVR | UvrC_RNaseH_dom | HHH_2 | HHH_5 | UvrC_RNaseH
TC MGYG000003025_8 MGYG000003025_8_11 16562 18175 + 3.A.1.5.27
TC MGYG000003025_8 MGYG000003025_8_12 18333 19289 + 3.A.1.5.38
TC MGYG000003025_8 MGYG000003025_8_13 19293 21308 + 3.A.1.5.25
TC MGYG000003025_8 MGYG000003025_8_14 21309 22136 + 3.A.1.5.27
CAZyme MGYG000003025_8 MGYG000003025_8_15 22268 23194 + CE7
Gene ID: MGYG000003025_8_6
Type: TC
Location: 7341 - 8171 (-)
Gene ID: MGYG000003025_8_7
Type: pfam
Location: 8430 - 11309 (+)
Gene ID: MGYG000003025_8_8
Type: pfam
Location: 11443 - 11943 (+)
Gene ID: MGYG000003025_8_9
Type: TC
Location: 11947 - 14250 (+)
Gene ID: MGYG000003025_8_10
Type: pfam
Location: 14257 - 16197 (+)
Gene ID: MGYG000003025_8_11
Type: TC
Location: 16562 - 18175 (+)
Gene ID: MGYG000003025_8_12
Type: TC
Location: 18333 - 19289 (+)
Gene ID: MGYG000003025_8_13
Type: TC
Location: 19293 - 21308 (+)
Gene ID: MGYG000003025_8_14
Type: TC
Location: 21309 - 22136 (+)
Gene ID: MGYG000003025_8_15
Type: CAZyme
Location: 22268 - 23194 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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