Cluster: MGYG000003015_CGC14
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003015
- CGC Family ID: CGCFAM_05003
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003015_211 | MGYG000003015_211_1 | 3 | 1127 | - | GH2 |
| pfam | MGYG000003015_211 | MGYG000003015_211_2 | 1249 | 2448 | - | PMI_typeI_cat | MPI_cupin_dom |
| TC | MGYG000003015_211 | MGYG000003015_211_3 | 2522 | 2968 | - | 4.A.1.1.1 |
Gene ID: MGYG000003015_211_1
Type: CAZyme
Location: 3 - 1127 (-)
Type: CAZyme
Location: 3 - 1127 (-)
Gene ID: MGYG000003015_211_2
Type: pfam
Location: 1249 - 2448 (-)
Type: pfam
Location: 1249 - 2448 (-)
Gene ID: MGYG000003015_211_3
Type: TC
Location: 2522 - 2968 (-)
Type: TC
Location: 2522 - 2968 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp902481695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003015_211_3 | vegan > omnivore | 3.45471 | 0.02609 |
| MGYG000003015_211_3 | vegetarian > omnivore | 1.35118 | 0.02809 |