Cluster: MGYG000003015_CGC1
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003015
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003015_7 | MGYG000003015_7_16 | 9623 | 11008 | - | 2.A.47.5.2 |
| NULL(UNKNOWN) | MGYG000003015_7 | MGYG000003015_7_17 | 11216 | 12748 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003015_7 | MGYG000003015_7_18 | 12794 | 14020 | - | 2.A.1.12.1 |
| TF | MGYG000003015_7 | MGYG000003015_7_19 | 14195 | 14905 | + | GntR |
| pfam | MGYG000003015_7 | MGYG000003015_7_20 | 14895 | 15968 | + | GFO_IDH_MocA | GFO_IDH_MocA_C | NAD_binding_3 | F420_oxidored | GFO_IDH_MocA_C3 |
| CAZyme | MGYG000003015_7 | MGYG000003015_7_21 | 15979 | 17085 | + | GH177 |
| pfam | MGYG000003015_7 | MGYG000003015_7_22 | 17162 | 17794 | - | PNPOx_N | PNP_phzG_C | Pyridox_oxase_2 |
| TC | MGYG000003015_7 | MGYG000003015_7_23 | 17861 | 18808 | - | 3.A.1.5.27 |
Gene ID: MGYG000003015_7_16
Type: TC
Location: 9623 - 11008 (-)
Type: TC
Location: 9623 - 11008 (-)
Gene ID: MGYG000003015_7_17
Type:
Location: 11216 - 12748 (+)
Type:
Location: 11216 - 12748 (+)
Gene ID: MGYG000003015_7_18
Type: TC
Location: 12794 - 14020 (-)
Type: TC
Location: 12794 - 14020 (-)
Gene ID: MGYG000003015_7_19
Type: TF
Location: 14195 - 14905 (+)
Type: TF
Location: 14195 - 14905 (+)
Gene ID: MGYG000003015_7_20
Type: pfam
Location: 14895 - 15968 (+)
Type: pfam
Location: 14895 - 15968 (+)
Gene ID: MGYG000003015_7_21
Type: CAZyme
Location: 15979 - 17085 (+)
Type: CAZyme
Location: 15979 - 17085 (+)
Gene ID: MGYG000003015_7_22
Type: pfam
Location: 17162 - 17794 (-)
Type: pfam
Location: 17162 - 17794 (-)
Gene ID: MGYG000003015_7_23
Type: TC
Location: 17861 - 18808 (-)
Type: TC
Location: 17861 - 18808 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Pasteurellaceae
Genus
Haemophilus_D
Species
Haemophilus_D sp902481695
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000003015_7_22 | vegetarian > omnivore | 1.26678 | 0.02809 |
| MGYG000003015_7_22 | vegetarian > vegan | 1.01303 | 0.03476 |
| MGYG000003015_7_23 | vegan > omnivore | 1.25258 | 0.02609 |