Cluster: MGYG000003013_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000003013
- CGC Family ID: CGCFAM_00328
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000003013_41 | MGYG000003013_41_3 | 3404 | 4849 | - | CE4 |
| pfam | MGYG000003013_41 | MGYG000003013_41_4 | 4993 | 6138 | + | DUF4317 |
| pfam | MGYG000003013_41 | MGYG000003013_41_5 | 6253 | 6972 | + | PseudoU_synth_2 | S4 |
| TC | MGYG000003013_41 | MGYG000003013_41_6 | 7030 | 8640 | - | 2.A.36.6.5 |
Gene ID: MGYG000003013_41_3
Type: CAZyme
Location: 3404 - 4849 (-)
Type: CAZyme
Location: 3404 - 4849 (-)
Gene ID: MGYG000003013_41_4
Type: pfam
Location: 4993 - 6138 (+)
Type: pfam
Location: 4993 - 6138 (+)
Gene ID: MGYG000003013_41_5
Type: pfam
Location: 6253 - 6972 (+)
Type: pfam
Location: 6253 - 6972 (+)
Gene ID: MGYG000003013_41_6
Type: TC
Location: 7030 - 8640 (-)
Type: TC
Location: 7030 - 8640 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Oribacterium
Species
Oribacterium sinus
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.