Cluster: MGYG000003007_CGC7
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000003007
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000003007_14 | MGYG000003007_14_34 | 30829 | 31512 | - | 9.B.149.1.11 |
| NULL(UNKNOWN) | MGYG000003007_14 | MGYG000003007_14_35 | 31522 | 31818 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000003007_14 | MGYG000003007_14_36 | 31805 | 33829 | - | 3.A.1.121.4 |
| pfam | MGYG000003007_14 | MGYG000003007_14_37 | 34931 | 35572 | - | TPK_catalytic | TPK_B1_binding |
| pfam | MGYG000003007_14 | MGYG000003007_14_38 | 35582 | 36271 | - | Hydrolase | HAD_2 |
| CAZyme | MGYG000003007_14 | MGYG000003007_14_39 | 36618 | 38864 | + | CBM48 | GH13_9 |
| CAZyme | MGYG000003007_14 | MGYG000003007_14_40 | 38959 | 41385 | + | GT35 |
| pfam | MGYG000003007_14 | MGYG000003007_14_41 | 41494 | 42642 | + | NTP_transferase | Hexapep_GlmU |
| pfam | MGYG000003007_14 | MGYG000003007_14_42 | 42647 | 43774 | + | NTP_transferase | Hexapep_GlmU |
| CAZyme | MGYG000003007_14 | MGYG000003007_14_43 | 43864 | 46209 | + | GT5 |
| CAZyme | MGYG000003007_14 | MGYG000003007_14_44 | 46427 | 49723 | + | GH13_39 | GH77 |
Gene ID: MGYG000003007_14_34
Type: TC
Location: 30829 - 31512 (-)
Type: TC
Location: 30829 - 31512 (-)
Gene ID: MGYG000003007_14_35
Type:
Location: 31522 - 31818 (-)
Type:
Location: 31522 - 31818 (-)
Gene ID: MGYG000003007_14_36
Type: TC
Location: 31805 - 33829 (-)
Type: TC
Location: 31805 - 33829 (-)
Gene ID: MGYG000003007_14_37
Type: pfam
Location: 34931 - 35572 (-)
Type: pfam
Location: 34931 - 35572 (-)
Gene ID: MGYG000003007_14_38
Type: pfam
Location: 35582 - 36271 (-)
Type: pfam
Location: 35582 - 36271 (-)
Gene ID: MGYG000003007_14_39
Type: CAZyme
Location: 36618 - 38864 (+)
Type: CAZyme
Location: 36618 - 38864 (+)
Gene ID: MGYG000003007_14_40
Type: CAZyme
Location: 38959 - 41385 (+)
Type: CAZyme
Location: 38959 - 41385 (+)
Gene ID: MGYG000003007_14_41
Type: pfam
Location: 41494 - 42642 (+)
Type: pfam
Location: 41494 - 42642 (+)
Gene ID: MGYG000003007_14_42
Type: pfam
Location: 42647 - 43774 (+)
Type: pfam
Location: 42647 - 43774 (+)
Gene ID: MGYG000003007_14_43
Type: CAZyme
Location: 43864 - 46209 (+)
Type: CAZyme
Location: 43864 - 46209 (+)
Gene ID: MGYG000003007_14_44
Type: CAZyme
Location: 46427 - 49723 (+)
Type: CAZyme
Location: 46427 - 49723 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900541025
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.