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Cluster: MGYG000003007_CGC14

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000003007_23 MGYG000003007_23_9 11062 12525 - 2.A.118.1.2
TF MGYG000003007_23 MGYG000003007_23_10 12723 13457 - GntR
pfam MGYG000003007_23 MGYG000003007_23_11 13712 16465 - Sigma54_activat | PRD | EIIA-man
CAZyme MGYG000003007_23 MGYG000003007_23_12 17014 18450 - GH32
pfam MGYG000003007_23 MGYG000003007_23_13 18480 18884 - EIIA-man
TC MGYG000003007_23 MGYG000003007_23_14 18918 19778 - 4.A.6.1.13
TC MGYG000003007_23 MGYG000003007_23_15 19771 20544 - 4.A.6.1.13
TC MGYG000003007_23 MGYG000003007_23_16 20560 21048 - 4.A.6.1.16
Gene ID: MGYG000003007_23_9
Type: TC
Location: 11062 - 12525 (-)
Gene ID: MGYG000003007_23_10
Type: TF
Location: 12723 - 13457 (-)
Gene ID: MGYG000003007_23_11
Type: pfam
Location: 13712 - 16465 (-)
Gene ID: MGYG000003007_23_12
Type: CAZyme
Location: 17014 - 18450 (-)
Gene ID: MGYG000003007_23_13
Type: pfam
Location: 18480 - 18884 (-)
Gene ID: MGYG000003007_23_14
Type: TC
Location: 18918 - 19778 (-)
Gene ID: MGYG000003007_23_15
Type: TC
Location: 19771 - 20544 (-)
Gene ID: MGYG000003007_23_16
Type: TC
Location: 20560 - 21048 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000003007_23_10 vegan > omnivore 1.65587 0.01057
MGYG000003007_23_10 vegetarian > omnivore 2.39948 0.02617
MGYG000003007_23_16 vegetarian > omnivore 1.53508 0.02617

🧭 Explore Read Mapping of CGC

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