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Cluster: MGYG000003003_CGC1

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000003003_5 MGYG000003003_5_8 7660 8772 + GT2
pfam MGYG000003003_5 MGYG000003003_5_9 8807 10084 + CPSase_L_D2 | ATP-grasp_4
TC MGYG000003003_5 MGYG000003003_5_10 10126 11490 + 2.A.27.2.1
pfam MGYG000003003_5 MGYG000003003_5_11 11518 11946 + EamA
TC MGYG000003003_5 MGYG000003003_5_12 11950 12300 + 2.A.7.33.5
NULL(UNKNOWN) MGYG000003003_5 MGYG000003003_5_13 12429 14285 - NULL(UNKNOWN)
[View Structural Homologs]
pfam MGYG000003003_5 MGYG000003003_5_14 14559 15773 + ATP-grasp_3 | CPSase_L_D2 | Dala_Dala_lig_C | ATP-grasp_4
TC MGYG000003003_5 MGYG000003003_5_15 15833 16618 + 2.A.102.3.1
Gene ID: MGYG000003003_5_8
Type: CAZyme
Location: 7660 - 8772 (+)
Gene ID: MGYG000003003_5_9
Type: pfam
Location: 8807 - 10084 (+)
Gene ID: MGYG000003003_5_10
Type: TC
Location: 10126 - 11490 (+)
Gene ID: MGYG000003003_5_11
Type: pfam
Location: 11518 - 11946 (+)
Gene ID: MGYG000003003_5_12
Type: TC
Location: 11950 - 12300 (+)
Gene ID: MGYG000003003_5_13
Type:
Location: 12429 - 14285 (-)
Gene ID: MGYG000003003_5_14
Type: pfam
Location: 14559 - 15773 (+)
Gene ID: MGYG000003003_5_15
Type: TC
Location: 15833 - 16618 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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