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Cluster: MGYG000002993_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000002993_10 MGYG000002993_10_44 47604 49253 - GH13_31
CAZyme MGYG000002993_10 MGYG000002993_10_45 49453 50739 + GH1
CAZyme MGYG000002993_10 MGYG000002993_10_46 50736 53015 + GH36
TC MGYG000002993_10 MGYG000002993_10_47 53012 54385 + 2.A.2.2.1
TC MGYG000002993_10 MGYG000002993_10_48 54499 57450 - 3.A.1.122.6
pfam MGYG000002993_10 MGYG000002993_10_49 57765 58796 + Gp_dh_N | Gp_dh_C
NULL(UNKNOWN) MGYG000002993_10 MGYG000002993_10_50 59873 60577 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000002993_10 MGYG000002993_10_51 60697 61998 + GH29
TF MGYG000002993_10 MGYG000002993_10_52 62132 62590 + MarR
TC MGYG000002993_10 MGYG000002993_10_53 62587 64332 + 3.A.1.135.5
TC MGYG000002993_10 MGYG000002993_10_54 64325 66280 + 3.A.1.135.5
Gene ID: MGYG000002993_10_44
Type: CAZyme
Location: 47604 - 49253 (-)
Gene ID: MGYG000002993_10_45
Type: CAZyme
Location: 49453 - 50739 (+)
Gene ID: MGYG000002993_10_46
Type: CAZyme
Location: 50736 - 53015 (+)
Gene ID: MGYG000002993_10_47
Type: TC
Location: 53012 - 54385 (+)
Gene ID: MGYG000002993_10_48
Type: TC
Location: 54499 - 57450 (-)
Gene ID: MGYG000002993_10_49
Type: pfam
Location: 57765 - 58796 (+)
Gene ID: MGYG000002993_10_50
Type:
Location: 59873 - 60577 (+)
Gene ID: MGYG000002993_10_51
Type: CAZyme
Location: 60697 - 61998 (+)
Gene ID: MGYG000002993_10_52
Type: TF
Location: 62132 - 62590 (+)
Gene ID: MGYG000002993_10_53
Type: TC
Location: 62587 - 64332 (+)
Gene ID: MGYG000002993_10_54
Type: TC
Location: 64325 - 66280 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000002993_10_49 vegan > omnivore 1.04290 0.04449

🧭 Explore Read Mapping of CGC

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