Cluster: MGYG000002993_CGC20
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002993
- CGC Family ID: CGCFAM_07327
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002993_41 | MGYG000002993_41_4 | 3034 | 8202 | + | CBM32 | CBM32 |
| pfam | MGYG000002993_41 | MGYG000002993_41_5 | 8461 | 9321 | + | Abhydrolase_1 | Hydrolase_4 | Abhydrolase_6 |
| STP | MGYG000002993_41 | MGYG000002993_41_6 | 10757 | 12109 | + | SBP_bac_1 |
| TC | MGYG000002993_41 | MGYG000002993_41_7 | 12230 | 13135 | + | 3.A.1.1.25 |
| TC | MGYG000002993_41 | MGYG000002993_41_8 | 13135 | 13986 | + | 3.A.1.1.18 |
| STP | MGYG000002993_41 | MGYG000002993_41_9 | 14154 | 15425 | + | SBP_bac_1 |
| CAZyme | MGYG000002993_41 | MGYG000002993_41_10 | 15429 | 17615 | + | GH78 |
| TC | MGYG000002993_41 | MGYG000002993_41_11 | 17593 | 19443 | + | 8.A.59.2.1 |
Gene ID: MGYG000002993_41_4
Type: CAZyme
Location: 3034 - 8202 (+)
Type: CAZyme
Location: 3034 - 8202 (+)
Gene ID: MGYG000002993_41_5
Type: pfam
Location: 8461 - 9321 (+)
Type: pfam
Location: 8461 - 9321 (+)
Gene ID: MGYG000002993_41_6
Type: STP
Location: 10757 - 12109 (+)
Type: STP
Location: 10757 - 12109 (+)
Gene ID: MGYG000002993_41_7
Type: TC
Location: 12230 - 13135 (+)
Type: TC
Location: 12230 - 13135 (+)
Gene ID: MGYG000002993_41_8
Type: TC
Location: 13135 - 13986 (+)
Type: TC
Location: 13135 - 13986 (+)
Gene ID: MGYG000002993_41_9
Type: STP
Location: 14154 - 15425 (+)
Type: STP
Location: 14154 - 15425 (+)
Gene ID: MGYG000002993_41_10
Type: CAZyme
Location: 15429 - 17615 (+)
Type: CAZyme
Location: 15429 - 17615 (+)
Gene ID: MGYG000002993_41_11
Type: TC
Location: 17593 - 19443 (+)
Type: TC
Location: 17593 - 19443 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp000432135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002993_41_4 | vegetarian > vegan | 1.10561 | 0.00038 |
| MGYG000002993_41_5 | vegetarian > vegan | 1.24424 | 0.00038 |
| MGYG000002993_41_6 | vegetarian > vegan | 1.12514 | 0.00038 |
| MGYG000002993_41_7 | vegetarian > vegan | 1.20123 | 0.00038 |
| MGYG000002993_41_8 | vegetarian > vegan | 1.19135 | 0.00038 |
| MGYG000002993_41_9 | vegetarian > vegan | 1.20977 | 0.00038 |
| MGYG000002993_41_10 | vegetarian > vegan | 1.47370 | 0.00038 |