Cluster: MGYG000002993_CGC17
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000002993
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000002993_34 | MGYG000002993_34_2 | 1741 | 3021 | + | GH13 |
| TF | MGYG000002993_34 | MGYG000002993_34_3 | 3096 | 3281 | + | PspC |
| TC | MGYG000002993_34 | MGYG000002993_34_4 | 3385 | 4635 | - | 2.A.23.1.5 |
| pfam | MGYG000002993_34 | MGYG000002993_34_5 | 4830 | 5180 | - | OAD_gamma |
| pfam | MGYG000002993_34 | MGYG000002993_34_6 | 5700 | 6776 | - | APH |
| TC | MGYG000002993_34 | MGYG000002993_34_7 | 7247 | 9337 | - | 3.A.3.32.3 |
Gene ID: MGYG000002993_34_2
Type: CAZyme
Location: 1741 - 3021 (+)
Type: CAZyme
Location: 1741 - 3021 (+)
Gene ID: MGYG000002993_34_3
Type: TF
Location: 3096 - 3281 (+)
Type: TF
Location: 3096 - 3281 (+)
Gene ID: MGYG000002993_34_4
Type: TC
Location: 3385 - 4635 (-)
Type: TC
Location: 3385 - 4635 (-)
Gene ID: MGYG000002993_34_5
Type: pfam
Location: 4830 - 5180 (-)
Type: pfam
Location: 4830 - 5180 (-)
Gene ID: MGYG000002993_34_6
Type: pfam
Location: 5700 - 6776 (-)
Type: pfam
Location: 5700 - 6776 (-)
Gene ID: MGYG000002993_34_7
Type: TC
Location: 7247 - 9337 (-)
Type: TC
Location: 7247 - 9337 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp000432135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.