Cluster: MGYG000002993_CGC13
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000002993
- CGC Family ID: CGCFAM_03281
- Continent: North America
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000002993_24 | MGYG000002993_24_11 | 19332 | 20270 | + | 3.A.1.1.7 |
| TC | MGYG000002993_24 | MGYG000002993_24_12 | 20282 | 21160 | + | 3.A.1.1.18 |
| CAZyme | MGYG000002993_24 | MGYG000002993_24_13 | 21157 | 22776 | + | GH66 |
| TF | MGYG000002993_24 | MGYG000002993_24_14 | 22770 | 23663 | + | HTH_AraC |
| CAZyme | MGYG000002993_24 | MGYG000002993_24_15 | 23695 | 25323 | + | GH13_31 |
Gene ID: MGYG000002993_24_11
Type: TC
Location: 19332 - 20270 (+)
Type: TC
Location: 19332 - 20270 (+)
Gene ID: MGYG000002993_24_12
Type: TC
Location: 20282 - 21160 (+)
Type: TC
Location: 20282 - 21160 (+)
Gene ID: MGYG000002993_24_13
Type: CAZyme
Location: 21157 - 22776 (+)
Type: CAZyme
Location: 21157 - 22776 (+)
Gene ID: MGYG000002993_24_14
Type: TF
Location: 22770 - 23663 (+)
Type: TF
Location: 22770 - 23663 (+)
Gene ID: MGYG000002993_24_15
Type: CAZyme
Location: 23695 - 25323 (+)
Type: CAZyme
Location: 23695 - 25323 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Oscillospiraceae
Genus
CAG-170
Species
CAG-170 sp000432135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000002993_24_11 | vegetarian > omnivore | 1.07801 | 0.03143 |
| MGYG000002993_24_11 | vegetarian > vegan | 1.62891 | 0.00038 |
| MGYG000002993_24_12 | vegetarian > vegan | 1.93590 | 0.00038 |
| MGYG000002993_24_13 | vegetarian > vegan | 1.96505 | 0.00038 |
| MGYG000002993_24_14 | vegetarian > vegan | 1.47789 | 0.00038 |
| MGYG000002993_24_15 | vegetarian > vegan | 1.54102 | 0.00038 |